RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 IGKV1-27A0A075B6S5 117 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 K7ERJ3 54 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 CACNA1GO43497 2377 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 MMP23AO75900 390 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 FGFBP3Q8TAT2 258 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 IGHG3P01860 377 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-201ENST00000240185 PFN2P35080 140 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 C11orf44Q8N8P7 122 aa11.29□□□□□ -0.6
TARDBP-201ENST00000240185 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-201ENST00000240185 CEND1Q8N111 149 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 SPTBN2O15020 2390 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 LTBRP36941 435 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 TRPT1Q86TN4 253 aaKnown RBP11.28□□□□□ -0.6
TARDBP-201ENST00000240185 MRPS18CQ9Y3D5 142 aaKnown RBP11.28□□□□□ -0.6
TARDBP-201ENST00000240185 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 TRAV25A0A0B4J276 109 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 LINC00473A8K010 186 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 SRRM5B3KS81 715 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 C5orf24Q7Z6I8 188 aa11.28□□□□□ -0.6
TARDBP-201ENST00000240185 TDRD6O60522 2096 aaKnown RBP11.28□□□□□ -0.6
TARDBP-201ENST00000240185 A0A0G2JRQ6 117 aa11.27□□□□□ -0.6
TARDBP-201ENST00000240185 LGALS9BQ3B8N2 356 aa11.27□□□□□ -0.6
TARDBP-201ENST00000240185 LGALS9CQ6DKI2 356 aa11.27□□□□□ -0.6
TARDBP-201ENST00000240185 Q8N8P6 123 aa11.27□□□□□ -0.6
TARDBP-201ENST00000240185 TMEM141Q96I45 108 aa11.27□□□□□ -0.6
TARDBP-201ENST00000240185 CRLF1O75462 422 aa11.27□□□□□ -0.6
TARDBP-201ENST00000240185 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.6
TARDBP-201ENST00000240185 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.61
TARDBP-201ENST00000240185 TINCRA0A1B0GVN0 87 aa11.27□□□□□ -0.61
TARDBP-201ENST00000240185 IGHV1-3A0A0C4DH29 117 aa11.27□□□□□ -0.61
TARDBP-201ENST00000240185 CCL25O15444 150 aa11.27□□□□□ -0.61
TARDBP-201ENST00000240185 MLANAQ16655 118 aa11.27□□□□□ -0.61
TARDBP-201ENST00000240185 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
TARDBP-201ENST00000240185 PTPRFP10586 1907 aa11.27□□□□□ -0.61
TARDBP-201ENST00000240185 IGHV1-46P01743 117 aa11.26□□□□□ -0.61
TARDBP-201ENST00000240185 Q6ZRM9 215 aa11.26□□□□□ -0.61
TARDBP-201ENST00000240185 DSCR8Q96T75 97 aa11.26□□□□□ -0.61
TARDBP-201ENST00000240185 LRRK1Q38SD2 2015 aa11.26□□□□□ -0.61
TARDBP-201ENST00000240185 FOCADQ5VW36 1801 aa11.26□□□□□ -0.61
TARDBP-201ENST00000240185 YPEL3P61236 119 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-201ENST00000240185 IGHG4P01861 327 aa11.26□□□□□ -0.61
TARDBP-201ENST00000240185 TAL2Q16559 108 aa11.26□□□□□ -0.61
TARDBP-201ENST00000240185 IGHV1-18A0A0C4DH31 117 aa11.25□□□□□ -0.61
TARDBP-201ENST00000240185 IGHV1-8P0DP01 117 aa11.25□□□□□ -0.61
TARDBP-201ENST00000240185 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
TARDBP-201ENST00000240185 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
TARDBP-201ENST00000240185 PRSS46E5RG02 174 aa11.25□□□□□ -0.61
TARDBP-201ENST00000240185 CYYR1Q96J86 154 aa11.25□□□□□ -0.61
TARDBP-201ENST00000240185 MRPL35Q9NZE8 188 aaKnown RBP11.25□□□□□ -0.61
TARDBP-201ENST00000240185 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
TARDBP-201ENST00000240185 FOXG1P55316 489 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-201ENST00000240185 CMC4P56277 68 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-201ENST00000240185 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
TARDBP-201ENST00000240185 H0YJW9 148 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 NDUFC2O95298 119 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 VWC2Q2TAL6 325 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 TMEM200BQ69YZ2 307 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 ABCA7Q8IZY2 2146 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 RNF5Q99942 180 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 LINC00205P59089 165 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 IL17RELQ6ZVW7 336 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 CEACAM8P31997 349 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-201ENST00000240185 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 PDE6HQ13956 83 aa11.24□□□□□ -0.61
TARDBP-201ENST00000240185 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.23□□□□□ -0.61
TARDBP-201ENST00000240185 SAP30O75446 220 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 SP9P0CG40 484 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 Q6ZVH6 145 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 THBDP07204 575 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 PI4KAP42356 2102 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 C5orf64Q2M2E5 130 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
TARDBP-201ENST00000240185 CD177Q8N6Q3 437 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 FREM3P0C091 2139 aa11.23□□□□□ -0.61
TARDBP-201ENST00000240185 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 NXPH4O95158 308 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 RNASE6Q93091 150 aaKnown RBP11.22□□□□□ -0.61
TARDBP-201ENST00000240185 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 CREBBPQ92793 2442 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 UBE2DNLQ8IWF7 75 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 TMEM75Q8N9X5 138 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 TRBV6-6A0A0A6YYG2 114 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 hADV29S1A0JD25 119 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 PSCAO43653 123 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 RPL35AP18077 110 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms