RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CACNA1BQ00975 2339 aa12.63□□□□□ -0.39
UBE3D-201ENST00000237186 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
UBE3D-201ENST00000237186 GOSR1O95249 250 aa12.63□□□□□ -0.39
UBE3D-201ENST00000237186 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
UBE3D-201ENST00000237186 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
UBE3D-201ENST00000237186 RPL7P18124 248 aaKnown RBP12.63□□□□□ -0.39
UBE3D-201ENST00000237186 PSG9Q00887 426 aa12.63□□□□□ -0.39
UBE3D-201ENST00000237186 CENPVL3A0A0U1RRI6 287 aa12.62□□□□□ -0.39
UBE3D-201ENST00000237186 S100A7P31151 101 aa12.62□□□□□ -0.39
UBE3D-201ENST00000237186 AMTP48728 403 aa12.62□□□□□ -0.39
UBE3D-201ENST00000237186 LBHQ53QV2 105 aaPredicted RBP12.62□□□□□ -0.39
UBE3D-201ENST00000237186 AAMDCQ9H7C9 122 aa12.62□□□□□ -0.39
UBE3D-201ENST00000237186 HAX1O00165 279 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 NPFFO15130 113 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 APOHP02749 345 aaPredicted RBP12.61□□□□□ -0.39
UBE3D-201ENST00000237186 PAX8Q06710 450 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 COX8CQ7Z4L0 72 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 OR2T8A6NH00 312 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 TOMM20LQ6UXN7 152 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 NIT1Q86X76 327 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 Q8N976 141 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 OR2D3Q8NGH3 330 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 ZNF502Q8TBZ5 544 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
UBE3D-201ENST00000237186 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
UBE3D-201ENST00000237186 FBLL1A6NHQ2 334 aaKnown RBP12.6□□□□□ -0.39
UBE3D-201ENST00000237186 M0R3E3 92 aa12.6□□□□□ -0.39
UBE3D-201ENST00000237186 C20orf144Q9BQM9 153 aa12.6□□□□□ -0.39
UBE3D-201ENST00000237186 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
UBE3D-201ENST00000237186 RABAC1Q9UI14 185 aa12.6□□□□□ -0.39
UBE3D-201ENST00000237186 RNF114Q9Y508 228 aa12.6□□□□□ -0.39
UBE3D-201ENST00000237186 CRIP1P50238 77 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 FAM162BQ5T6X4 162 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 UNQ5815/PRO19632Q6UWF5 114 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 SH2D7A6NKC9 451 aaPredicted RBP12.59□□□□□ -0.39
UBE3D-201ENST00000237186 ATP6V0E1O15342 81 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 IGHV3-23P01764 117 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 PMCHP20382 165 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 CSN1S1P47710 185 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 Q71RC1 249 aaPredicted RBP12.59□□□□□ -0.39
UBE3D-201ENST00000237186 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 NDFIP1Q9BT67 221 aa12.59□□□□□ -0.39
UBE3D-201ENST00000237186 RAB9AP51151 201 aa12.58□□□□□ -0.4
UBE3D-201ENST00000237186 C15orf32Q32M92 178 aa12.58□□□□□ -0.4
UBE3D-201ENST00000237186 TDRG1Q3Y452 100 aa12.58□□□□□ -0.4
UBE3D-201ENST00000237186 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
UBE3D-201ENST00000237186 C2orf88Q9BSF0 95 aa12.58□□□□□ -0.4
UBE3D-201ENST00000237186 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.4
UBE3D-201ENST00000237186 PRB1P04280 392 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 RHOGP84095 191 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 A0A1B0GW15 77 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 KRTDAPP60985 99 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 Q6AWC8 147 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 FAM19A2Q8N3H0 131 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 C5orf56Q8N8D9 126 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
UBE3D-201ENST00000237186 ATP6V0BQ99437 205 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
UBE3D-201ENST00000237186 MED13LQ71F56 2210 aa12.56□□□□□ -0.4
UBE3D-201ENST00000237186 A0A1B0GUT8 65 aa12.56□□□□□ -0.4
UBE3D-201ENST00000237186 NDUFS8O00217 210 aa12.56□□□□□ -0.4
UBE3D-201ENST00000237186 HSBP1O75506 76 aa12.56□□□□□ -0.4
UBE3D-201ENST00000237186 C3orf79P0CE67 100 aa12.56□□□□□ -0.4
UBE3D-201ENST00000237186 ECSCRQ19T08 205 aa12.56□□□□□ -0.4
UBE3D-201ENST00000237186 SAPCD1Q5SSQ6 148 aa12.56□□□□□ -0.4
UBE3D-201ENST00000237186 LOC102724200A0A096LPH7 203 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-201ENST00000237186 IGHG4P01861 327 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 CLEC3BP05452 202 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 GPR183P32249 361 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 CRIP2P52943 208 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-201ENST00000237186 CYB5R2Q6BCY4 276 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 URB1-AS1Q96HZ7 61 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 PIMREGQ9BSJ6 248 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 VAMP8Q9BV40 100 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 A0A087X0K7 114 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 BUB3O43684 328 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 CT45A10P0DMU9 189 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 RIGQ13278 110 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 CHCHD1Q96BP2 118 aaKnown RBP12.55□□□□□ -0.4
UBE3D-201ENST00000237186 MEGF9Q9H1U4 602 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
UBE3D-201ENST00000237186 WNK2Q9Y3S1 2297 aa12.55□□□□□ -0.4
UBE3D-201ENST00000237186 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 TRBV7-1A0A0A6YYK4 115 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 IGHV1-69DA0A0B4J2H0 117 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 LINC01548A6NM66 108 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 CHEK1O14757 476 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 IGHV1-69P01742 117 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 C19orf54Q5BKX5 351 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 PIFOQ8TCI5 191 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 C10orf105Q8TEF2 133 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 CCDC140Q96MF4 163 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 PRR25Q96S07 402 aa12.54□□□□□ -0.4
UBE3D-201ENST00000237186 IGHV4-61A0A0C4DH41 118 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 G3V318 75 aa12.53□□□□□ -0.4
UBE3D-201ENST00000237186 RAB4AP20338 218 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms