RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ATP5IP56385 69 aaPredicted RBP10.33□□□□□ -0.76
MSH2-201ENST00000233146 LY6DQ14210 128 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 RPL39P5Q59GN2 51 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 OR13A1Q8NGR1 328 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 LINC01546A6NGU7 62 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
MSH2-201ENST00000233146 LYRM7Q5U5X0 104 aa10.33□□□□□ -0.76
MSH2-201ENST00000233146 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 UBE2D1P51668 147 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 FOXG1P55316 489 aaPredicted RBP10.32□□□□□ -0.76
MSH2-201ENST00000233146 Q71RC1 249 aaPredicted RBP10.32□□□□□ -0.76
MSH2-201ENST00000233146 TRGV9Q99603 122 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 NPYP01303 97 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 LIFP15018 202 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 PRCDQ00LT1 54 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 TBC1D28Q2M2D7 210 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 FOXC2Q99958 501 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 RTL8AQ9BWD3 113 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 SIGLEC9Q9Y336 463 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 LAMA1P25391 3075 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 TRAV40A0A0B4J280 105 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 ATP5LO75964 103 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 C3orf56Q8N813 242 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 OBP2AQ9NY56 170 aa10.32□□□□□ -0.76
MSH2-201ENST00000233146 TRAV8-1A0A0A6YYK1 113 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 ZNF503-AS2A6NEH8 195 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 RNASE2P10153 161 aaKnown RBP10.31□□□□□ -0.76
MSH2-201ENST00000233146 GLRXP35754 106 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 TNFRSF4P43489 277 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 OR1L8Q8NGR8 309 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 ODF3Q96PU9 254 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 TMEM160Q9NX00 188 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 LTBP2Q14767 1821 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 A0A096LPE4 126 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 A0A1W2PPZ6 126 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 PLAUP00749 431 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 FAM90A1Q86YD7 464 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 TUSC5Q8IXB3 177 aa10.31□□□□□ -0.76
MSH2-201ENST00000233146 H3BVH4 76 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 IGHV3-9P01782 118 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 SCGB1C2P0DMR2 95 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 C21orf62Q9NYP8 219 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 SPTBN2O15020 2390 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 SPINT2O43291 252 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 LEPP41159 167 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 RAXQ9Y2V3 346 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 FLYWCH2Q96CP2 140 aaKnown RBP10.3□□□□□ -0.76
MSH2-201ENST00000233146 Q9H3A6 140 aa10.3□□□□□ -0.76
MSH2-201ENST00000233146 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 RPL7P18124 248 aaKnown RBP10.29□□□□□ -0.76
MSH2-201ENST00000233146 C1orf229Q6ZS94 237 aaPredicted RBP10.29□□□□□ -0.76
MSH2-201ENST00000233146 CALYQ9NYX4 217 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 TNCP24821 2201 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
MSH2-201ENST00000233146 HOXB4P17483 251 aaPredicted RBP10.29□□□□□ -0.76
MSH2-201ENST00000233146 PRNTQ86SH4 94 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 C11orf53Q8IXP5 236 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 C15orf53Q8NAA6 179 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 TPPP3Q9BW30 176 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
MSH2-201ENST00000233146 MRPL35Q9NZE8 188 aaKnown RBP10.29□□□□□ -0.76
MSH2-201ENST00000233146 TRBV6-1A0A0K0K1D8 114 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 SMKR1H3BMG3 65 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 CKS2P33552 79 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 PROCRQ9UNN8 238 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 POU2AF1Q16633 256 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 OR11H6Q8NGC7 330 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 DCTN5Q9BTE1 182 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 CXCL13O43927 109 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 ZNF134P52741 427 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 FAM19A5Q7Z5A7 132 aaPredicted RBP10.28□□□□□ -0.76
MSH2-201ENST00000233146 LRRC75A-AS1Q8N1F1 130 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 CELSR3Q9NYQ7 3312 aa10.28□□□□□ -0.76
MSH2-201ENST00000233146 GGNQ86UU5 652 aa10.27□□□□□ -0.76
MSH2-201ENST00000233146 IGFLR1Q9H665 355 aa10.27□□□□□ -0.76
MSH2-201ENST00000233146 IGHV3-64DA0A0J9YX35 117 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
MSH2-201ENST00000233146 TFF1P04155 84 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 B3GALT5-AS1P59052 145 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 BAALCQ8WXS3 180 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 CHCHD5Q9BSY4 110 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 DEFB126Q9BYW3 111 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 GNG12Q9UBI6 72 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 FREM1Q5H8C1 2179 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 SLC25A20O43772 301 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 IGHG3P01860 377 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 LYZL1Q6UWQ5 148 aa10.27□□□□□ -0.77
MSH2-201ENST00000233146 RPS19BP1Q86WX3 136 aaKnown RBP10.27□□□□□ -0.77
MSH2-201ENST00000233146 UPK2O00526 184 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 WNT9BO14905 357 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 IGHV4-34P06331 123 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms