RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SFTPCP11686 197 aa11.09□□□□□ -0.63
NFKB1-201ENST00000226574 LINC00173Q6ZV60 143 aa11.09□□□□□ -0.63
NFKB1-201ENST00000226574 ARHGAP32A7KAX9 2087 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 NDPQ00604 133 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 IGHV3OR16-12A0A075B7B8 117 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 TRGV3P03979 118 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 PRR20EP86478 221 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 PRR20CP86479 221 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 PRR20DP86480 221 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 PRR20BP86481 221 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 PRR20AP86496 221 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 Q8TCH9 128 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 MRPL16Q9NX20 251 aaKnown RBP11.08□□□□□ -0.64
NFKB1-201ENST00000226574 PDLIM4P50479 330 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 RPS20P60866 119 aaKnown RBP11.08□□□□□ -0.64
NFKB1-201ENST00000226574 SMAGPQ0VAQ4 97 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 Q6ZSR3 168 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 SLC25A2Q9BXI2 301 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
NFKB1-201ENST00000226574 RHOGP84095 191 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 ATP5L2Q7Z4Y8 100 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 CHCHD1Q96BP2 118 aaKnown RBP11.07□□□□□ -0.64
NFKB1-201ENST00000226574 C17orf77Q96MU5 243 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 MRPL27Q9P0M9 148 aaKnown RBP11.07□□□□□ -0.64
NFKB1-201ENST00000226574 PROP1O75360 226 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 CENPVQ7Z7K6 275 aaPredicted RBP11.07□□□□□ -0.64
NFKB1-201ENST00000226574 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 NDUFA4L2Q9NRX3 87 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
NFKB1-201ENST00000226574 IGKV1OR2-108A0A075B7D4 117 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 A0A0G2JNJ9 132 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 WT1P19544 449 aaPredicted RBP11.07□□□□□ -0.64
NFKB1-201ENST00000226574 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
NFKB1-201ENST00000226574 Q9UFV3 132 aa11.07□□□□□ -0.64
NFKB1-201ENST00000226574 A0A1B0GWJ7 208 aa11.06□□□□□ -0.64
NFKB1-201ENST00000226574 IGHG3P01860 377 aa11.06□□□□□ -0.64
NFKB1-201ENST00000226574 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
NFKB1-201ENST00000226574 DNAH14Q0VDD8 3507 aa11.06□□□□□ -0.64
NFKB1-201ENST00000226574 EMP1P54849 157 aa11.06□□□□□ -0.64
NFKB1-201ENST00000226574 ZNF672Q499Z4 452 aaPredicted RBP11.06□□□□□ -0.64
NFKB1-201ENST00000226574 EBLN2Q6P2I7 272 aa11.06□□□□□ -0.64
NFKB1-201ENST00000226574 BRWD1-AS2P59051 145 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 PRR30Q53SZ7 412 aaPredicted RBP11.05□□□□□ -0.64
NFKB1-201ENST00000226574 TMEM75Q8N9X5 138 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 HCFC1P51610 2035 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 ATP5G2Q06055 141 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 C8orf49Q96NF6 230 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 VPS13AQ96RL7 3174 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 A0A0G2JLM5 398 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 ERCC8Q13216 396 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 ZNF56Q15929 161 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 TRGV9Q99603 122 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 CHODLQ9H9P2 273 aa11.05□□□□□ -0.64
NFKB1-201ENST00000226574 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 RNASE4P34096 147 aaKnown RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 DPF1Q92782 380 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 RAXQ9Y2V3 346 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 IGHV1-24A0A0C4DH33 117 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 E7EUB6 86 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 SH2D1AO60880 128 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 Q86TA4 180 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 KIR2DL5BA0A0G2JN68 375 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 KIR2DL5BA0A0G2JPC4 375 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 CD300EQ496F6 205 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-201ENST00000226574 Q6AWC8 147 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 KIR2DL5AQ8N109 375 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 C11orf52Q96A22 123 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
NFKB1-201ENST00000226574 NAV2Q8IVL1 2488 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 IGHV3-64A0A075B6Q5 118 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 A0A1W2PNU3 283 aaPredicted RBP11.03□□□□□ -0.64
NFKB1-201ENST00000226574 TOMM40O96008 361 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 KIR3DS1Q14943 382 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 KIAA1549Q9HCM3 1950 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 MSMPQ1L6U9 139 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 FAM159AQ6UWV7 190 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 CHD9Q3L8U1 2897 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 FAM231BA6NCW3 169 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 SPRY2O43597 315 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 PVRIGQ6DKI7 326 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
NFKB1-201ENST00000226574 TDGF1P13385 188 aa11.02□□□□□ -0.64
NFKB1-201ENST00000226574 KRTAP27-1Q3LI81 207 aa11.02□□□□□ -0.64
NFKB1-201ENST00000226574 SAMD5Q5TGI4 173 aa11.02□□□□□ -0.64
NFKB1-201ENST00000226574 BUB1B-PAK6H3BSN5 160 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 FXYD5Q96DB9 178 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms