RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 NDUFB8O95169 186 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 PMVKQ15126 192 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 RPRMLQ8N4K4 120 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 ZNF48Q96MX3 618 aaPredicted RBP8.53□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV1OR2-108A0A075B7D4 117 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 ARMS2P0C7Q2 107 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 IFITM2Q01629 132 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 GAGE6Q13070 117 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 MRPL27Q9P0M9 148 aaKnown RBP8.53□□□□□ -1.04
TRPS1-201ENST00000220888 DOCK10Q96BY6 2186 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV1-27A0A075B6S5 117 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 ROS1P08922 2347 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 IGHV1OR15-1A0A075B7D0 117 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 A0A0A6YYD4 124 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 PRB1P04280 392 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 SHANK2-AS3Q9BTD1 123 aa8.53□□□□□ -1.04
TRPS1-201ENST00000220888 LYPD3O95274 346 aa8.52□□□□□ -1.04
TRPS1-201ENST00000220888 ANGP03950 147 aaKnown RBP8.52□□□□□ -1.04
TRPS1-201ENST00000220888 MGST2Q99735 147 aa8.52□□□□□ -1.04
TRPS1-201ENST00000220888 A0A096LPF7 62 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 NDUFA4O00483 81 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 TAL2Q16559 108 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 C1QL4Q86Z23 238 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 ZNF479Q96JC4 524 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 COL11A1P12107 1806 aaPredicted RBP8.52□□□□□ -1.05
TRPS1-201ENST00000220888 ESDP10768 282 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 PDE6HQ13956 83 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 ZNRF2Q8NHG8 242 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
TRPS1-201ENST00000220888 LRRC37AA6NMS7 1700 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 CCL18P55774 89 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 Q6P435 159 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 PARP14Q460N5 1801 aa8.52□□□□□ -1.05
TRPS1-201ENST00000220888 PFN2P35080 140 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 NMSQ5H8A3 153 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 PLA2G2CQ5R387 149 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 RPP25LQ8N5L8 163 aaKnown RBP8.51□□□□□ -1.05
TRPS1-201ENST00000220888 VPREB3Q9UKI3 123 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 TAF1LQ8IZX4 1826 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 LINC00473A8K010 186 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 TMEM170AQ8WVE7 144 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 NOTCH3Q9UM47 2321 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 RNF222A6NCQ9 220 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 CDKN1BP46527 198 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 TCF15Q12870 199 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 Q8TCH9 128 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 Q9HAA7 133 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 CLDN16Q9Y5I7 305 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
TRPS1-201ENST00000220888 CARHSP1Q9Y2V2 147 aaKnown RBP8.51□□□□□ -1.05
TRPS1-201ENST00000220888 DOCK7Q96N67 2140 aa8.51□□□□□ -1.05
TRPS1-201ENST00000220888 MMP23AO75900 390 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 DERL1Q9BUN8 251 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 OTOFQ9HC10 1997 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 CCL24O00175 119 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 AGMATQ9BSE5 352 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 DMRT1Q9Y5R6 373 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 SCN8AQ9UQD0 1980 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 TRBV6-6A0A0A6YYG2 114 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 FGF16O43320 207 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 YPEL3P61236 119 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-201ENST00000220888 RNF126Q9BV68 326 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 VSIRQ9H7M9 311 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 KLK5Q9Y337 293 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-201ENST00000220888 A0A1B0GV90 55 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 A0A1W2PPI3 338 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 H3BMM0 161 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 NXPH4O95158 308 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 IGKV1-16P04430 117 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 HSD52Q0P140 79 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 DEFB112Q30KQ8 113 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 C1orf194Q5T5A4 169 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
TRPS1-201ENST00000220888 TRAV8-1A0A0A6YYK1 113 aa8.49□□□□□ -1.05
TRPS1-201ENST00000220888 TRAV25A0A0B4J276 109 aa8.49□□□□□ -1.05
TRPS1-201ENST00000220888 PIFOQ8TCI5 191 aa8.49□□□□□ -1.05
TRPS1-201ENST00000220888 GPR179Q6PRD1 2367 aa8.49□□□□□ -1.05
TRPS1-201ENST00000220888 SIPA1L3O60292 1781 aaPredicted RBP8.49□□□□□ -1.05
TRPS1-201ENST00000220888 A0A0J9YY99 117 aa8.49□□□□□ -1.05
TRPS1-201ENST00000220888 I3L3M4 83 aa8.49□□□□□ -1.05
TRPS1-201ENST00000220888 DMRTC2Q8IXT2 367 aaPredicted RBP8.49□□□□□ -1.05
TRPS1-201ENST00000220888 MPZP25189 248 aa8.49□□□□□ -1.05
TRPS1-201ENST00000220888 BRWD3Q6RI45 1802 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 A0A087WV48 116 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 C2orf82Q6UX34 121 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 FNDC4Q9H6D8 234 aaPredicted RBP8.48□□□□□ -1.05
TRPS1-201ENST00000220888 LAMTOR2Q9Y2Q5 125 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 KLF2Q9Y5W3 355 aaPredicted RBP8.48□□□□□ -1.05
TRPS1-201ENST00000220888 CACNA1HO95180 2353 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 TRAV12-2A0A075B6T6 113 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 TRAV8-3A0A0A6YYJ7 113 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 CRLF1O75462 422 aa8.48□□□□□ -1.05
TRPS1-201ENST00000220888 PFN1P07737 140 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms