RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 H0YJW9 148 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 DPH3P1Q9H4G8 78 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 SIGLEC9Q9Y336 463 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 TRAV13-1A0A0B4J241 112 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 VCYO14598 125 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 LINC01559Q495D7 138 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 Q6P435 159 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 MRPL27Q9P0M9 148 aaKnown RBP12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 LY96Q9Y6Y9 160 aa12.2□□□□□ -0.46
NDFIP2-201ENST00000218652 ARMS2P0C7Q2 107 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 PLEKHB2Q96CS7 222 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 LAMTOR3Q9UHA4 124 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 IGKV1D-17A0A075B6S4 117 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 A0A087WWL8 130 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 TRAV8-3A0A0A6YYJ7 113 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 PSG3Q16557 428 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 C9orf139Q6ZV77 190 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 RNASE2P10153 161 aaKnown RBP12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 C6orf226Q5I0X4 101 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 SPXQ9BT56 116 aa12.19□□□□□ -0.46
NDFIP2-201ENST00000218652 PHLDA1Q8WV24 401 aaPredicted RBP12.18□□□□□ -0.46
NDFIP2-201ENST00000218652 HEATR5AQ86XA9 2040 aa12.18□□□□□ -0.46
NDFIP2-201ENST00000218652 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
NDFIP2-201ENST00000218652 UBE2E2Q96LR5 201 aa12.18□□□□□ -0.46
NDFIP2-201ENST00000218652 LIME1Q9H400 295 aa12.18□□□□□ -0.46
NDFIP2-201ENST00000218652 ZNRD1Q9P1U0 126 aa12.18□□□□□ -0.46
NDFIP2-201ENST00000218652 ANKHD1Q8IWZ3 2542 aaKnown RBP12.18□□□□□ -0.46
NDFIP2-201ENST00000218652 ESDP10768 282 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 NSUN5P1Q3KNT7 163 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 TOMM40O96008 361 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 PRIMA1Q86XR5 153 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 RBBP6Q7Z6E9 1792 aaKnown RBP12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 CD5LO43866 347 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 CD59P13987 128 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 Q0VFX4 171 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 ZNF562Q6V9R5 426 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 SPACA3Q8IXA5 215 aa12.17□□□□□ -0.46
NDFIP2-201ENST00000218652 TRBV6-6A0A0A6YYG2 114 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 A8MWP6 167 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 C9JAW5 83 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 SAP30O75446 220 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 LINC00477Q96M19 166 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 IGKV1-6A0A0C4DH72 117 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 THADAQ6YHU6 1953 aa12.16□□□□□ -0.46
NDFIP2-201ENST00000218652 LYPD2Q6UXB3 125 aa12.15□□□□□ -0.46
NDFIP2-201ENST00000218652 C17orf82Q86X59 251 aaPredicted RBP12.15□□□□□ -0.46
NDFIP2-201ENST00000218652 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
NDFIP2-201ENST00000218652 ZNF236Q9UL36 1845 aa12.15□□□□□ -0.46
NDFIP2-201ENST00000218652 LGALS1P09382 135 aaKnown RBP12.15□□□□□ -0.46
NDFIP2-201ENST00000218652 CSRP1P21291 193 aaKnown RBP12.15□□□□□ -0.46
NDFIP2-201ENST00000218652 RNF5Q99942 180 aa12.15□□□□□ -0.46
NDFIP2-201ENST00000218652 TMEM213A2RRL7 107 aa12.15□□□□□ -0.47
NDFIP2-201ENST00000218652 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.47
NDFIP2-201ENST00000218652 EFNA4P52798 201 aa12.15□□□□□ -0.47
NDFIP2-201ENST00000218652 ADAMTSL5Q6ZMM2 481 aa12.15□□□□□ -0.47
NDFIP2-201ENST00000218652 VGLL1Q99990 258 aa12.15□□□□□ -0.47
NDFIP2-201ENST00000218652 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.47
NDFIP2-201ENST00000218652 POLR3KQ9Y2Y1 108 aaPredicted RBP12.15□□□□□ -0.47
NDFIP2-201ENST00000218652 RGPD4Q7Z3J3 1758 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 CLPSP04118 112 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 ERCC8Q13216 396 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 CYYR1Q96J86 154 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 GAFA1Q96PS6 74 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 OVOL3O00110 214 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 A0A1W2PPI3 338 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 LYL1P12980 280 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 RASL10AQ92737 203 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 FREM1Q5H8C1 2179 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 INS-IGF2F8WCM5 200 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 INSP01308 110 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 CFHR2P36980 270 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
NDFIP2-201ENST00000218652 PRR14LQ5THK1 2151 aa12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 SSBP2P81877 361 aaPredicted RBP12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 Q86TA4 180 aa12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 ETDBQ3ZM63 59 aa12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 MINOS1Q5TGZ0 78 aa12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 MINOS1-NBL1R4GNA1 71 aa12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 OOSP1A8MZH6 123 aa12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 ITGB1BP1O14713 200 aa12.13□□□□□ -0.47
NDFIP2-201ENST00000218652 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms