RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 AAMDCQ9H7C9 122 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 CBY1Q9Y3M2 126 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 ZZEF1O43149 2961 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 DMXL2Q8TDJ6 3036 aa10.47□□□□□ -0.73
SRP54-201ENST00000216774 NPIPB5A8MRT5 1133 aa10.46□□□□□ -0.73
SRP54-201ENST00000216774 GNG7O60262 68 aa10.46□□□□□ -0.73
SRP54-201ENST00000216774 SCRT2Q9NQ03 307 aa10.46□□□□□ -0.73
SRP54-201ENST00000216774 CSN3P07498 182 aa10.46□□□□□ -0.74
SRP54-201ENST00000216774 CSN1S1P47710 185 aa10.46□□□□□ -0.74
SRP54-201ENST00000216774 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.74
SRP54-201ENST00000216774 IGLV11-55A0A075B6I3 123 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 M0R1W7 72 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 MFAP4P55083 255 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 C5orf64Q2M2E5 130 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 FBXL19-AS1Q494R0 122 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 FA2HQ7L5A8 372 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 COX8CQ7Z4L0 72 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 LINC01560Q8TB33 94 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 HILPDAQ9Y5L2 63 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 M0R3E3 92 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 PSG9Q00887 426 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 C12orf54Q6X4T0 127 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 PRSS3P2Q8NHM4 247 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 ZNF747Q9BV97 191 aa10.45□□□□□ -0.74
SRP54-201ENST00000216774 PCNX1Q96RV3 2341 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 FBLL1A6NHQ2 334 aaKnown RBP10.44□□□□□ -0.74
SRP54-201ENST00000216774 ODF3BA8MYP8 253 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 FANCD2OSQ96PS1 177 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 U3KQK5 164 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 ARF6P62330 175 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 KLF17Q5JT82 389 aaPredicted RBP10.44□□□□□ -0.74
SRP54-201ENST00000216774 ZNF562Q6V9R5 426 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 IGFBPL1Q8WX77 278 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 TIMD4Q96H15 378 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 C8orf49Q96NF6 230 aa10.44□□□□□ -0.74
SRP54-201ENST00000216774 IGHV2-70DA0A0C4DH43 119 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 TMEM189A5PLL7 270 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 SAPCD1Q5SSQ6 148 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 Q6ZVH6 145 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 TTC9CQ8N5M4 171 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 ASCL2Q99929 193 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 ACACAQ13085 2346 aa10.43□□□□□ -0.74
SRP54-201ENST00000216774 F8W735 103 aaPredicted RBP10.42□□□□□ -0.74
SRP54-201ENST00000216774 NUDT3O95989 172 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 RPL7P18124 248 aaKnown RBP10.42□□□□□ -0.74
SRP54-201ENST00000216774 PRTN3P24158 256 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 LYZL1Q6UWQ5 148 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 ARPC1AQ92747 370 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 PMCHL2Q9BQD1 86 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 SH2D1AO60880 128 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 HIST1H1AQ02539 215 aaPredicted RBP10.42□□□□□ -0.74
SRP54-201ENST00000216774 HES1Q14469 280 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 FBLN7Q53RD9 439 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 FAM104BQ5XKR9 115 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 CCDC144NLQ6NUI1 221 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 C21orf62Q9NYP8 219 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 THYN1Q9P016 225 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 ABCA1O95477 2261 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 APC2O95996 2303 aa10.42□□□□□ -0.74
SRP54-201ENST00000216774 LOC105371242A0A075B767 164 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 H0Y8G0 127 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 K7ENP7 123 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 BCL6BQ8N143 479 aaPredicted RBP10.41□□□□□ -0.74
SRP54-201ENST00000216774 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 DPF1Q92782 380 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 S4R3C0 116 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 PIEZO2Q9H5I5 2752 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 FAM90A27PA6NNH2 459 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 D6R8Y8 96 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 K7EP13 123 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 COX8AP10176 69 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 IFI27P40305 119 aaPredicted RBP10.41□□□□□ -0.74
SRP54-201ENST00000216774 NBL1P41271 181 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
SRP54-201ENST00000216774 ORMDL3Q8N138 153 aa10.41□□□□□ -0.74
SRP54-201ENST00000216774 MCRIP2Q9BUT9 160 aaKnown RBP10.41□□□□□ -0.74
SRP54-201ENST00000216774 OOSP1A8MZH6 123 aa10.4□□□□□ -0.74
SRP54-201ENST00000216774 KLRD1Q13241 179 aa10.4□□□□□ -0.74
SRP54-201ENST00000216774 PRELID3AQ96N28 172 aa10.4□□□□□ -0.74
SRP54-201ENST00000216774 PRR25Q96S07 402 aa10.4□□□□□ -0.74
SRP54-201ENST00000216774 SIGLEC8Q9NYZ4 499 aa10.4□□□□□ -0.74
SRP54-201ENST00000216774 POLEQ07864 2286 aa10.4□□□□□ -0.74
SRP54-201ENST00000216774 TAX1BP3O14907 124 aa10.4□□□□□ -0.75
SRP54-201ENST00000216774 GRNP28799 593 aaKnown RBP10.4□□□□□ -0.75
SRP54-201ENST00000216774 S100A7P31151 101 aa10.4□□□□□ -0.75
SRP54-201ENST00000216774 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.75
SRP54-201ENST00000216774 Q8N6K4 173 aa10.4□□□□□ -0.75
SRP54-201ENST00000216774 TIMM8BQ9Y5J9 83 aaPredicted RBP10.4□□□□□ -0.75
SRP54-201ENST00000216774 A0A096LNJ9 63 aa10.39□□□□□ -0.75
SRP54-201ENST00000216774 TMEM213A2RRL7 107 aa10.39□□□□□ -0.75
SRP54-201ENST00000216774 NDPQ00604 133 aa10.39□□□□□ -0.75
SRP54-201ENST00000216774 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
SRP54-201ENST00000216774 IGKV2-40A0A087WW87 121 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms