RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 MAP6D1Q9H9H5 199 aa15.07■□□□□ 0
RHBDD3-201ENST00000216085 UBE2L3P68036 154 aaKnown RBP15.06■□□□□ 0
RHBDD3-201ENST00000216085 DEFA6Q01524 100 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 RAB24Q969Q5 203 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 UBQLN2Q9UHD9 624 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 CTXND1A0A1B0GTU2 59 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 PDE6HQ13956 83 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 NDUFA5Q16718 116 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 ODF3L2Q3SX64 289 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 PSMG4Q5JS54 123 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 DPPA3Q6W0C5 159 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 TUBA4BQ9H853 241 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 CLEC5AQ9NY25 188 aa15.06■□□□□ 0
RHBDD3-201ENST00000216085 SOCS3O14543 225 aa15.05■□□□□ -0
RHBDD3-201ENST00000216085 PYYP10082 97 aa15.05■□□□□ -0
RHBDD3-201ENST00000216085 RAB5CP51148 216 aa15.05■□□□□ -0
RHBDD3-201ENST00000216085 DEFB131AP59861 70 aa15.05■□□□□ -0
RHBDD3-201ENST00000216085 Q8N1Y9 231 aa15.05■□□□□ -0
RHBDD3-201ENST00000216085 RNF141Q8WVD5 230 aa15.05■□□□□ -0
RHBDD3-201ENST00000216085 FBN3Q75N90 2809 aa15.05■□□□□ -0
RHBDD3-201ENST00000216085 ZNF253O75346 499 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 OR10J4P0C629 311 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 STAG3L2P0CL84 134 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 STAG3L3P0CL85 134 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 FAM24BQ8N5W8 94 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 MRAPQ8TCY5 172 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 PHYHIPLQ96FC7 376 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 LINC00052Q96N35 136 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 MEGF8Q7Z7M0 2845 aa15.04■□□□□ -0
RHBDD3-201ENST00000216085 H3BQ15 152 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 ATP6V1G1O75348 118 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 CXorf1O96002 111 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 NBEAP1P0C6P0 100 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 PSG9Q00887 426 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 BLNKQ8WV28 456 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 TRBV19A0A075B6N1 114 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 K7EIL1 84 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 HMGB3O15347 200 aaKnown RBP15.03■□□□□ -0
RHBDD3-201ENST00000216085 ARL14EPLP0DKL9 152 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 DEFB121Q5J5C9 76 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 TEX261Q6UWH6 196 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 DEFB125Q8N687 156 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 AAMDCQ9H7C9 122 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 SRD5A3Q9H8P0 318 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 ZNF586Q9NXT0 402 aa15.03■□□□□ -0
RHBDD3-201ENST00000216085 SNRPCP09234 159 aaKnown RBP15.02□□□□□ -0.01
RHBDD3-201ENST00000216085 FAM213BQ8TBF2 198 aa15.02□□□□□ -0.01
RHBDD3-201ENST00000216085 FXYD5Q96DB9 178 aa15.02□□□□□ -0.01
RHBDD3-201ENST00000216085 ZNF331Q9NQX6 463 aaPredicted RBP15.02□□□□□ -0.01
RHBDD3-201ENST00000216085 C19orf73Q9NVV2 129 aa15.02□□□□□ -0.01
RHBDD3-201ENST00000216085 H3BTX0 84 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 IGHV4-30-4P0DP06 118 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 IQCF2Q8IXL9 164 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 C17orf77Q96MU5 243 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 WFDC10AQ9H1F0 79 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 TMEM167BQ9NRX6 74 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 MAP1LC3B2A6NCE7 125 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 IFNA7P01567 189 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 APRG1Q8IVJ8 170 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 MAP1LC3BQ9GZQ8 125 aa15.01□□□□□ -0.01
RHBDD3-201ENST00000216085 EIF3GO75821 320 aaKnown RBP eCLIP15□□□□□ -0.01
RHBDD3-201ENST00000216085 ZNF738Q8NE65 137 aa15□□□□□ -0.01
RHBDD3-201ENST00000216085 ZNF680Q8NEM1 530 aa15□□□□□ -0.01
RHBDD3-201ENST00000216085 SAT2Q96F10 170 aaPredicted RBP15□□□□□ -0.01
RHBDD3-201ENST00000216085 ZNF503Q96F45 646 aa15□□□□□ -0.01
RHBDD3-201ENST00000216085 TRAV8-2A0A0B4J237 113 aa14.99□□□□□ -0.01
RHBDD3-201ENST00000216085 A8MZ25 164 aa14.99□□□□□ -0.01
RHBDD3-201ENST00000216085 SLC17A3O00476 420 aa14.99□□□□□ -0.01
RHBDD3-201ENST00000216085 ZNF726P1Q15940 193 aa14.99□□□□□ -0.01
RHBDD3-201ENST00000216085 EBLN2Q6P2I7 272 aa14.99□□□□□ -0.01
RHBDD3-201ENST00000216085 LYPD1Q8N2G4 141 aa14.99□□□□□ -0.01
RHBDD3-201ENST00000216085 PRELID1Q9Y255 219 aa14.99□□□□□ -0.01
RHBDD3-201ENST00000216085 TEX46H3BTG2 121 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 GCHFRP30047 84 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 SULT1A2P50226 295 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 FAM74A1Q5RGS3 127 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 STHQ8IWL8 128 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 RNF182Q8N6D2 247 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 FHITP49789 147 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 PSG3Q16557 428 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 IGFL4Q6B9Z1 124 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 FOXI2Q6ZQN5 318 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 SSX7Q7RTT5 188 aa14.98□□□□□ -0.01
RHBDD3-201ENST00000216085 H2AFB1P0C5Y9 115 aa14.97□□□□□ -0.01
RHBDD3-201ENST00000216085 ACTL10Q5JWF8 245 aa14.97□□□□□ -0.01
RHBDD3-201ENST00000216085 SFT2D1Q8WV19 159 aa14.97□□□□□ -0.01
RHBDD3-201ENST00000216085 RANP62826 216 aaKnown RBP14.96□□□□□ -0.01
RHBDD3-201ENST00000216085 MRPL53Q96EL3 112 aaKnown RBP14.96□□□□□ -0.01
RHBDD3-201ENST00000216085 C20orf173Q96LM9 149 aa14.96□□□□□ -0.01
RHBDD3-201ENST00000216085 LOC102724200A0A096LPH7 203 aaPredicted RBP14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 NDUFB4O95168 129 aa14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 FGF8P55075 233 aaPredicted RBP14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 ZNF124Q15973 351 aa14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 ALKAL2Q6UX46 152 aa14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 MBD3L1Q8WWY6 194 aa14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 RPUSD4Q96CM3 377 aaKnown RBP14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 SAV1Q9H4B6 383 aaPredicted RBP14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 PLA2G2EQ9NZK7 142 aa14.96□□□□□ -0.02
RHBDD3-201ENST00000216085 FRMD6-AS1P0C7T7 363 aa14.95□□□□□ -0.02
RHBDD3-201ENST00000216085 CSN1S1P47710 185 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms