RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 NDUFS8O00217 210 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 LMO1P25800 156 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 FAM90A2PQ658T7 463 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 DMRTC2Q8IXT2 367 aaPredicted RBP11□□□□□ -0.65
SF3A1-201ENST00000215793 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
SF3A1-201ENST00000215793 BPESC1Q9GZL8 116 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 ZNF329Q86UD4 541 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 TP53BP1Q12888 1972 aaPredicted RBP11□□□□□ -0.65
SF3A1-201ENST00000215793 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 LINC00205P59089 165 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 FHL1Q13642 323 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 ZC2HC1BQ5TFG8 222 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 TMEM158Q8WZ71 300 aa11□□□□□ -0.65
SF3A1-201ENST00000215793 A0A1W2PPI3 338 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 NDUFB8O95169 186 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 LIME1Q9H400 295 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 NCOR1P1Q9H4R4 102 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 E7EQL1 145 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 GATA3P23771 443 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 LINC01356Q8N9X3 169 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 C1orf159Q96HA4 380 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 FAM231BA6NCW3 169 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 UNQ6494/PRO21346Q6UXR6 183 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 LCNL1Q6ZST4 164 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
SF3A1-201ENST00000215793 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 ANAPC13Q9BS18 74 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 OVOL3O00110 214 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 ERCC8Q13216 396 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 MLANAQ16655 118 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 AMN1Q8IY45 258 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 LY6G5BQ8NDX9 201 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 MYMXA0A1B0GTQ4 84 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 GATD1Q8NB37 220 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 hDV102S1A0JD36 115 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 YPEL3P61236 119 aaPredicted RBP10.98□□□□□ -0.65
SF3A1-201ENST00000215793 PYY3Q5JQD4 70 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 SELENOKQ9Y6D0 94 aa10.98□□□□□ -0.65
SF3A1-201ENST00000215793 GATA4P43694 442 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 UBE2E1P51965 193 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 IGKV1-6A0A0C4DH72 117 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
SF3A1-201ENST00000215793 MRPL52Q86TS9 123 aaKnown RBP10.97□□□□□ -0.65
SF3A1-201ENST00000215793 RNF114Q9Y508 228 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 TMEM14BQ9NUH8 114 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 ZNF492Q9P255 531 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 ARMS2P0C7Q2 107 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 FAM110DQ8TAY7 271 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-201ENST00000215793 OVOL2Q9BRP0 275 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 MSRB2Q9Y3D2 182 aa10.97□□□□□ -0.65
SF3A1-201ENST00000215793 PHF3Q92576 2039 aaKnown RBP10.96□□□□□ -0.65
SF3A1-201ENST00000215793 LY6HO94772 140 aa10.96□□□□□ -0.65
SF3A1-201ENST00000215793 Q8TCH9 128 aa10.96□□□□□ -0.65
SF3A1-201ENST00000215793 MPV17L2Q567V2 206 aa10.96□□□□□ -0.65
SF3A1-201ENST00000215793 DLX4Q92988 240 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-201ENST00000215793 IGHV3-53P01767 116 aa10.96□□□□□ -0.66
SF3A1-201ENST00000215793 RPL35AP18077 110 aaKnown RBP10.96□□□□□ -0.66
SF3A1-201ENST00000215793 CT83Q5H943 113 aa10.96□□□□□ -0.66
SF3A1-201ENST00000215793 FXYD7P58549 80 aa10.96□□□□□ -0.66
SF3A1-201ENST00000215793 FANCMQ8IYD8 2048 aa10.96□□□□□ -0.66
SF3A1-201ENST00000215793 RHODO00212 210 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 Q0VG73 95 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 SSC4DQ8WTU2 575 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 SCN5AQ14524 2016 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 A0A087X0K7 114 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 TMEM75Q8N9X5 138 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 SPAG8Q99932 426 aaPredicted RBP10.95□□□□□ -0.66
SF3A1-201ENST00000215793 DLEU1O43261 78 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 MSMBP08118 114 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 SYNJ2BPP57105 145 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 PRR31Q5SQ13 230 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 LINC00479Q96M42 142 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 NDUFA4L2Q9NRX3 87 aa10.95□□□□□ -0.66
SF3A1-201ENST00000215793 TRPT1Q86TN4 253 aaKnown RBP10.94□□□□□ -0.66
SF3A1-201ENST00000215793 PRIMA1Q86XR5 153 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 A6NNC1 897 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 LEPROTO15243 131 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 TNFRSF6BO95407 300 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 ANAPC10Q9UM13 185 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 A0A087WWL8 130 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 NPC2P61916 151 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 NAA38Q9BRA0 125 aaKnown RBP10.94□□□□□ -0.66
SF3A1-201ENST00000215793 LAMTOR3Q9UHA4 124 aa10.94□□□□□ -0.66
SF3A1-201ENST00000215793 ZNF407Q9C0G0 2248 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 TRAV13-1A0A0B4J241 112 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 SMKR1H3BMG3 65 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 DEFB131AP59861 70 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 ZNF124Q15973 351 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 PCNX1Q96RV3 2341 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 ADCYAP1P18509 176 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 K7ENP7 123 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms