RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ZDBF2Q9HCK1 2354 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 HSD52Q0P140 79 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 DIAPH2-AS1Q14236 149 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 TMEM14EPQ6UXP3 125 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 TPSG1Q9NRR2 321 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 G3V318 75 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 SAA4P35542 130 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 LAMTOR3Q9UHA4 124 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 GGTLC3B5MD39 225 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 F2Z2F3 143 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 OVOL3O00110 214 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 FHL1Q13642 323 aa11.03□□□□□ -0.64
TGFBR3-201ENST00000212355 WIPF3A6NGB9 483 aa11.02□□□□□ -0.64
TGFBR3-201ENST00000212355 INS-IGF2F8WCM5 200 aa11.02□□□□□ -0.64
TGFBR3-201ENST00000212355 DUSP14O95147 198 aaKnown RBP11.02□□□□□ -0.64
TGFBR3-201ENST00000212355 INSP01308 110 aa11.02□□□□□ -0.64
TGFBR3-201ENST00000212355 CITED2Q99967 270 aaPredicted RBP11.02□□□□□ -0.64
TGFBR3-201ENST00000212355 E7EQL1 145 aa11.02□□□□□ -0.65
TGFBR3-201ENST00000212355 OVOL1O14753 267 aa11.02□□□□□ -0.65
TGFBR3-201ENST00000212355 RNASE2P10153 161 aaKnown RBP11.02□□□□□ -0.65
TGFBR3-201ENST00000212355 SPINK13Q1W4C9 94 aa11.02□□□□□ -0.65
TGFBR3-201ENST00000212355 C5orf64Q2M2E5 130 aa11.02□□□□□ -0.65
TGFBR3-201ENST00000212355 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 TRBV24-1A0A075B6N3 115 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 RNF223E7ERA6 249 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 MST1LQ2TV78 715 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 JPT2Q9H910 190 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 A0A087WX48 190 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 C1orf194Q5T5A4 169 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 POLR3KQ9Y2Y1 108 aaPredicted RBP11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 TEX43Q6ZNM6 134 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 RHPN1-AS1Q9BWJ2 59 aa11.01□□□□□ -0.65
TGFBR3-201ENST00000212355 CADP27708 2225 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 WDR81Q562E7 1941 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 LIME1Q9H400 295 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 TNFRSF6BO95407 300 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 ZC2HC1BQ5TFG8 222 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 FAM166AQ6J272 317 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 TRGV9Q99603 122 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 SPSB3Q6PJ21 355 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 MDS2Q8NDY4 140 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 FNDC1Q4ZHG4 1894 aaPredicted RBP11□□□□□ -0.65
TGFBR3-201ENST00000212355 MAJINQ3KP22 176 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 C2orf82Q6UX34 121 aa11□□□□□ -0.65
TGFBR3-201ENST00000212355 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 DLEU1O43261 78 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 TOMM40O96008 361 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 DEFB131AP59861 70 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 RSPO3Q9BXY4 272 aaPredicted RBP10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 ESDP10768 282 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 EFNA4P52798 201 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 ATXN8Q156A1 80 aa10.99□□□□□ -0.65
TGFBR3-201ENST00000212355 FAM90A9PA6NNJ1 464 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 Q86TA4 180 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 ZNF114Q8NC26 417 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 SIP14410 1827 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 ADAMTSL5Q6ZMM2 481 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 C9JAW5 83 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 INTS1Q8N201 2190 aaKnown RBP10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 PPBPP02775 128 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 CHAC1Q9BUX1 264 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 KMT2EQ8IZD2 1858 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 FAM120AOSQ5T036 256 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 WDR86Q86TI4 376 aa10.98□□□□□ -0.65
TGFBR3-201ENST00000212355 GAGE12JA6NER3 117 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 GAGE1Q13065 139 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 GAGE4Q13068 117 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 GAGE5Q13069 117 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 TEX36Q5VZQ5 186 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 TMEM242Q9NWH2 141 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 RS1O15537 224 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 NDUFB8O95169 186 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 PFN2P35080 140 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 TCF15Q12870 199 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 ITGB1BP1O14713 200 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 COL6A6A6NMZ7 2263 aa10.97□□□□□ -0.65
TGFBR3-201ENST00000212355 K7ERJ3 54 aa10.96□□□□□ -0.65
TGFBR3-201ENST00000212355 GAGE2EQ4V326 116 aa10.96□□□□□ -0.65
TGFBR3-201ENST00000212355 GAGE2DQ9UEU5 116 aa10.96□□□□□ -0.65
TGFBR3-201ENST00000212355 SPTA1P02549 2419 aa10.96□□□□□ -0.65
TGFBR3-201ENST00000212355 FRMPD3Q5JV73 1810 aa10.96□□□□□ -0.65
TGFBR3-201ENST00000212355 MMP23AO75900 390 aa10.96□□□□□ -0.65
TGFBR3-201ENST00000212355 TMEM86BQ8N661 226 aa10.96□□□□□ -0.65
TGFBR3-201ENST00000212355 HEATR5AQ86XA9 2040 aa10.96□□□□□ -0.66
TGFBR3-201ENST00000212355 TRBV7-1A0A0A6YYK4 115 aa10.96□□□□□ -0.66
TGFBR3-201ENST00000212355 TP53TG1Q9Y2A0 90 aa10.96□□□□□ -0.66
TGFBR3-201ENST00000212355 PSCAO43653 123 aa10.96□□□□□ -0.66
TGFBR3-201ENST00000212355 Q6ZVH6 145 aa10.96□□□□□ -0.66
TGFBR3-201ENST00000212355 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms