RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GNG7O60262 68 aa11.98□□□□□ -0.49
EFNB1-201ENST00000204961 NUDT3O95989 172 aa11.98□□□□□ -0.49
EFNB1-201ENST00000204961 CELSR2Q9HCU4 2923 aa11.98□□□□□ -0.49
EFNB1-201ENST00000204961 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
EFNB1-201ENST00000204961 NCR2O95944 276 aa11.98□□□□□ -0.49
EFNB1-201ENST00000204961 HBBP68871 147 aa11.98□□□□□ -0.49
EFNB1-201ENST00000204961 MEF2CQ06413 473 aaPredicted RBP11.98□□□□□ -0.49
EFNB1-201ENST00000204961 CEACAM4O75871 244 aa11.97□□□□□ -0.49
EFNB1-201ENST00000204961 TMEM213A2RRL7 107 aa11.97□□□□□ -0.49
EFNB1-201ENST00000204961 A8MWL6 223 aa11.97□□□□□ -0.49
EFNB1-201ENST00000204961 ESDP10768 282 aa11.97□□□□□ -0.49
EFNB1-201ENST00000204961 BUB1B-PAK6H3BSN5 160 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 TCF15Q12870 199 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 ECSCRQ19T08 205 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 TM4SF20Q53R12 229 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 C18orf15Q96N68 181 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 FOXE3Q13461 319 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 FAM169BQ8N8A8 192 aa11.96□□□□□ -0.49
EFNB1-201ENST00000204961 ZANQ9Y493 2812 aa11.96□□□□□ -0.5
EFNB1-201ENST00000204961 LRRK2Q5S007 2527 aa11.96□□□□□ -0.5
EFNB1-201ENST00000204961 MC5RP33032 325 aa11.96□□□□□ -0.5
EFNB1-201ENST00000204961 MRGPRG-AS1Q2M3A8 158 aa11.96□□□□□ -0.5
EFNB1-201ENST00000204961 ZNF672Q499Z4 452 aaPredicted RBP11.96□□□□□ -0.5
EFNB1-201ENST00000204961 Q5PR19 223 aa11.96□□□□□ -0.5
EFNB1-201ENST00000204961 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.5
EFNB1-201ENST00000204961 NACAE9PAV3 2078 aa11.96□□□□□ -0.5
EFNB1-201ENST00000204961 PIEZO1Q92508 2521 aa11.95□□□□□ -0.5
EFNB1-201ENST00000204961 A0A087X0K7 114 aa11.95□□□□□ -0.5
EFNB1-201ENST00000204961 ITGB1BP1O14713 200 aa11.95□□□□□ -0.5
EFNB1-201ENST00000204961 OR10J3Q5JRS4 329 aa11.95□□□□□ -0.5
EFNB1-201ENST00000204961 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
EFNB1-201ENST00000204961 NPIPB5A8MRT5 1133 aa11.95□□□□□ -0.5
EFNB1-201ENST00000204961 APOHP02749 345 aaPredicted RBP11.95□□□□□ -0.5
EFNB1-201ENST00000204961 URB1-AS1Q96HZ7 61 aa11.95□□□□□ -0.5
EFNB1-201ENST00000204961 TRBV9A0A0B4J1U6 114 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 IGKV1-17P01599 117 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 SAPCD1Q5SSQ6 148 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 NUP37Q8NFH4 326 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 TRAV9-2A0A087WT02 112 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
EFNB1-201ENST00000204961 LOXL1Q08397 574 aaPredicted RBP11.94□□□□□ -0.5
EFNB1-201ENST00000204961 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 IGFL3Q6UXB1 125 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 LY96Q9Y6Y9 160 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 IGLC1P0CG04 106 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
EFNB1-201ENST00000204961 C19orf24Q9BVV8 132 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 NGBQ9NPG2 151 aa11.94□□□□□ -0.5
EFNB1-201ENST00000204961 IGHV1-24A0A0C4DH33 117 aa11.93□□□□□ -0.5
EFNB1-201ENST00000204961 GP9P14770 177 aa11.93□□□□□ -0.5
EFNB1-201ENST00000204961 LGALS7P47929 136 aa11.93□□□□□ -0.5
EFNB1-201ENST00000204961 OR4F17Q8NGA8 305 aa11.93□□□□□ -0.5
EFNB1-201ENST00000204961 TMEM70Q9BUB7 260 aa11.93□□□□□ -0.5
EFNB1-201ENST00000204961 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
EFNB1-201ENST00000204961 C8orf46Q8TAG6 207 aa11.93□□□□□ -0.5
EFNB1-201ENST00000204961 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
EFNB1-201ENST00000204961 GOSR1O95249 250 aa11.93□□□□□ -0.5
EFNB1-201ENST00000204961 RIPPLY3P57055 190 aa11.92□□□□□ -0.5
EFNB1-201ENST00000204961 AMN1Q8IY45 258 aa11.92□□□□□ -0.5
EFNB1-201ENST00000204961 TEX22C9J3V5 150 aa11.92□□□□□ -0.5
EFNB1-201ENST00000204961 FSTL3O95633 263 aa11.92□□□□□ -0.5
EFNB1-201ENST00000204961 ORM1P02763 201 aa11.92□□□□□ -0.5
EFNB1-201ENST00000204961 RNF182Q8N6D2 247 aa11.92□□□□□ -0.5
EFNB1-201ENST00000204961 TRAV9-1A0A075B6T8 112 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 CLEC2AQ6UVW9 174 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 ASCL5Q7RTU5 278 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 Q86TA4 180 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 MSRB1Q9NZV6 116 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 K7EMI3 77 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 HLA-DRB1P01911 266 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 EVI2AP22794 236 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 IFI27P40305 119 aaPredicted RBP11.91□□□□□ -0.5
EFNB1-201ENST00000204961 DLX6P56179 175 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 RBPMS2Q6ZRY4 209 aaKnown RBP11.91□□□□□ -0.5
EFNB1-201ENST00000204961 DYNAPQ8N1N2 210 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 RNF125Q96EQ8 232 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 ERCC8Q13216 396 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 PRSS57Q6UWY2 283 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 BPIFA4PQ86YQ2 179 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 PSG8Q9UQ74 426 aa11.91□□□□□ -0.5
EFNB1-201ENST00000204961 OR5AL1P0C617 328 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 CT45A10P0DMU9 189 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 DEFB1P60022 68 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 FAM120AOSQ5T036 256 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 FA2HQ7L5A8 372 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 PKD1L2Q7Z442 2459 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 C2orf70A6NJV1 201 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 NDPQ00604 133 aa11.9□□□□□ -0.5
EFNB1-201ENST00000204961 HSBP1L1C9JCN9 74 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 RAB37Q96AX2 223 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 GPR183P32249 361 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 THAP8Q8NA92 274 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 RAXQ9Y2V3 346 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 ITPR1Q14643 2758 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 D6R8Y8 96 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 TMEM219Q86XT9 240 aa11.89□□□□□ -0.51
EFNB1-201ENST00000204961 STXBP6Q8NFX7 210 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms