RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF320A2RRD8 509 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 NBEAP1P0C6P0 100 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 TOMM20LQ6UXN7 152 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 ZFAND3Q9H8U3 227 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 TMEM14CQ9P0S9 112 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 IGHV3OR16-8A0A075B7F1 116 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 HELTA6NFD8 242 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 IGHG4P01861 327 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 RAB9AP51151 201 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 BLNKQ8WV28 456 aa15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 NSD1Q96L73 2696 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-201ENST00000162749 HIVEP1P15822 2718 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 FABP4P15090 132 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 PSMB8P28062 276 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 SSTP61278 116 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 OR5I1Q13606 314 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 CENPWQ5EE01 88 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 SLC17A3O00476 420 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 COA6Q5JTJ3 125 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 CDPF1Q6NVV7 123 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 C10orf99Q6UWK7 81 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 S100A7AQ86SG5 101 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 BPIFA4PQ86YQ2 179 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 TMEM183AQ8IXX5 376 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 HIST1H2BLQ99880 126 aa15.2■□□□□ 0.02
TNFRSF1A-201ENST00000162749 BMPR1BO00238 502 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 TRBV12-3P01733 135 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 RANP62826 216 aaKnown RBP15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 TMEM86BQ8N661 226 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 RABAC1Q9UI14 185 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 H3BTX0 84 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 IGHV3-11P01762 117 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 MYCNOSP40205 109 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 ZNF586Q9NXT0 402 aa15.19■□□□□ 0.02
TNFRSF1A-201ENST00000162749 XKRY2A2RUG3 117 aa15.18■□□□□ 0.02
TNFRSF1A-201ENST00000162749 MRPS12O15235 138 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-201ENST00000162749 GNG4P50150 75 aa15.18■□□□□ 0.02
TNFRSF1A-201ENST00000162749 DEFA6Q01524 100 aa15.18■□□□□ 0.02
TNFRSF1A-201ENST00000162749 RELQ04864 619 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-201ENST00000162749 SMR3AQ99954 134 aa15.18■□□□□ 0.02
TNFRSF1A-201ENST00000162749 IL36BQ9NZH7 164 aa15.18■□□□□ 0.02
TNFRSF1A-201ENST00000162749 A0A0G2JLM5 398 aa15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 HIST1H1EP10412 219 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 ARL3P36405 182 aa15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 IGLV2-8P01709 118 aa15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 IGLC2P0DOY2 106 aa15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 BTF3L4Q96K17 158 aa15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 V9GYV3 84 aa15.17■□□□□ 0.02
TNFRSF1A-201ENST00000162749 CLPSL1A2RUU4 121 aa15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 DNAJC9-AS1A6NH13 148 aa15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 Q8N2B8 174 aa15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 IGF2BP2-AS1Q96M15 143 aa15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 TRAPPC1Q9Y5R8 145 aa15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 OR4F17Q8NGA8 305 aa15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 OR4X2Q8NGF9 303 aa15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 PACRGQ96M98 296 aaPredicted RBP15.16■□□□□ 0.02
TNFRSF1A-201ENST00000162749 ERVFC1-1P60608 527 aa15.15■□□□□ 0.02
TNFRSF1A-201ENST00000162749 ESM1Q9NQ30 184 aa15.15■□□□□ 0.02
TNFRSF1A-201ENST00000162749 TMEM89A2RUT3 159 aa15.15■□□□□ 0.02
TNFRSF1A-201ENST00000162749 AMBPP02760 352 aa15.15■□□□□ 0.02
TNFRSF1A-201ENST00000162749 C17orf77Q96MU5 243 aa15.15■□□□□ 0.02
TNFRSF1A-201ENST00000162749 TRBV19A0A075B6N1 114 aa15.14■□□□□ 0.01
TNFRSF1A-201ENST00000162749 GCGP01275 180 aa15.14■□□□□ 0.01
TNFRSF1A-201ENST00000162749 LINC00479Q96M42 142 aa15.14■□□□□ 0.01
TNFRSF1A-201ENST00000162749 RNASE7Q9H1E1 156 aaKnown RBP15.14■□□□□ 0.01
TNFRSF1A-201ENST00000162749 Q9H3A6 140 aa15.14■□□□□ 0.01
TNFRSF1A-201ENST00000162749 TMEM160Q9NX00 188 aa15.14■□□□□ 0.01
TNFRSF1A-201ENST00000162749 PGPA6NDG6 321 aa15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 FAM181BA6NEQ2 426 aa15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 SLC35B1P78383 322 aa15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 SERTAD4Q9NUC0 356 aa15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 RNF24Q9Y225 148 aa15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 BUB3O43684 328 aa15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 CNN1P51911 297 aaKnown RBP15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 OR8I2Q8N0Y5 310 aa15.13■□□□□ 0.01
TNFRSF1A-201ENST00000162749 SETXQ7Z333 2677 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 TRAV9-1A0A075B6T8 112 aa15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 FRMD6-AS1P0C7T7 363 aa15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 RPL7P18124 248 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 PEX7O00628 323 aa15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 SLC25A5P05141 298 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 RPLP1P05386 114 aaKnown RBP15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 S100A7P31151 101 aa15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 GNG5P63218 68 aa15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 UNQ9165/PRO28630Q6UXU0 137 aa15.12■□□□□ 0.01
TNFRSF1A-201ENST00000162749 FOXE3Q13461 319 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 RPEL1Q2QD12 228 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 EXOC3-AS1Q8N2X6 119 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 C5orf17Q8NAS9 161 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 METTL26Q96S19 204 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 OSTCQ9NRP0 149 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 CDC42EP3Q9UKI2 254 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 EPDR1Q9UM22 224 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 NDUFA4O00483 81 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 ZNF207O43670 478 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 LY6G6DO95868 133 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 APOHP02749 345 aaPredicted RBP15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 ELANEP08246 267 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 SIGLEC15Q6ZMC9 328 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms