RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 NGBQ9NPG2 151 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 AP5S1Q9NUS5 200 aa11.09□□□□□ -0.63
USH1C-201ENST00000005226 TRAV8-6A0A0B4J262 113 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 CNIH1O95406 144 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
USH1C-201ENST00000005226 NAA38Q9BRA0 125 aaKnown RBP11.08□□□□□ -0.64
USH1C-201ENST00000005226 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 SVEP1Q4LDE5 3571 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 TRBV19A0A075B6N1 114 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 E7EQL1 145 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 PSG9Q00887 426 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 FA2HQ7L5A8 372 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 BUB1B-PAK6H3BSN5 160 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 LINC01545Q5VT33 79 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 IGFL3Q6UXB1 125 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 C8orf31Q8N9H6 132 aa11.08□□□□□ -0.64
USH1C-201ENST00000005226 MED13LQ71F56 2210 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 IGLV1-47P01700 117 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 IL4P05112 153 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 GPR183P32249 361 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 RIGQ13278 110 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 ANKRD39Q53RE8 183 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 C16orf54Q6UWD8 224 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 C2orf91Q6ZV80 131 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 WFDC3Q8IUB2 231 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 FAM231BA6NCW3 169 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 SMKR1H3BMG3 65 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 SIGLEC15Q6ZMC9 328 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
USH1C-201ENST00000005226 A0A096LNJ9 63 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 D6R8Y8 96 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 K7EIM0 57 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 CDKN1BP46527 198 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 C12orf54Q6X4T0 127 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 RPEQ96AT9 228 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 WNK2Q9Y3S1 2297 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
USH1C-201ENST00000005226 RHOGP84095 191 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 LYZL1Q6UWQ5 148 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 BPIFA4PQ86YQ2 179 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 SHANK2-AS3Q9BTD1 123 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 HILPDAQ9Y5L2 63 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 ZNF292O60281 2723 aa11.06□□□□□ -0.64
USH1C-201ENST00000005226 IGHV3OR16-8A0A075B7F1 116 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 PSG3Q16557 428 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 RALYQ9UKM9 306 aaKnown RBP11.05□□□□□ -0.64
USH1C-201ENST00000005226 CACNA1BQ00975 2339 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 RBPJQ06330 500 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 ASCL5Q7RTU5 278 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 SCNM1Q9BWG6 230 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 SIGLEC8Q9NYZ4 499 aa11.05□□□□□ -0.64
USH1C-201ENST00000005226 ASH1LQ9NR48 2969 aaKnown RBP11.04□□□□□ -0.64
USH1C-201ENST00000005226 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 LY6HO94772 140 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 COX8AP10176 69 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
USH1C-201ENST00000005226 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 NBASA2RRP1 2371 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 PRRG2O14669 202 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 TIMM23O14925 209 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 OR10AG1Q8NH19 301 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 MS4A6AQ9H2W1 248 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 KAAG1Q9UBP8 84 aa11.04□□□□□ -0.64
USH1C-201ENST00000005226 IGKV2-40A0A087WW87 121 aaPredicted RBP11.03□□□□□ -0.64
USH1C-201ENST00000005226 H3BRN7 92 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 CD5LO43866 347 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 IGKV2D-40P01614 121 aaPredicted RBP11.03□□□□□ -0.64
USH1C-201ENST00000005226 PRSS57Q6UWY2 283 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 RNF125Q96EQ8 232 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 PPIAL4CA0A0B4J2A2 164 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 PPIAL4GP0DN37 164 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 CSN1S1P47710 185 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 NHLH1Q02575 133 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 PRR30Q53SZ7 412 aaPredicted RBP11.03□□□□□ -0.64
USH1C-201ENST00000005226 TMEM75Q8N9X5 138 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 VPS25Q9BRG1 176 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 ONECUT1Q9UBC0 465 aa11.03□□□□□ -0.64
USH1C-201ENST00000005226 IGHV3-35A0A0C4DH35 117 aa11.02□□□□□ -0.64
USH1C-201ENST00000005226 C7orf71A4D174 169 aa11.02□□□□□ -0.64
USH1C-201ENST00000005226 CACNG7P62955 275 aa11.02□□□□□ -0.64
USH1C-201ENST00000005226 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.64
USH1C-201ENST00000005226 Q8TAT8 98 aa11.02□□□□□ -0.64
USH1C-201ENST00000005226 PRELID3AQ96N28 172 aa11.02□□□□□ -0.64
USH1C-201ENST00000005226 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
USH1C-201ENST00000005226 TMEM97Q5BJF2 176 aa11.02□□□□□ -0.65
USH1C-201ENST00000005226 RABAC1Q9UI14 185 aa11.02□□□□□ -0.65
USH1C-201ENST00000005226 MRPS12O15235 138 aaKnown RBP11.01□□□□□ -0.65
USH1C-201ENST00000005226 S100A7P31151 101 aa11.01□□□□□ -0.65
USH1C-201ENST00000005226 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
USH1C-201ENST00000005226 TMEM189A5PLL7 270 aa11.01□□□□□ -0.65
USH1C-201ENST00000005226 K7EQM0 130 aa11.01□□□□□ -0.65
USH1C-201ENST00000005226 SH2D1AO60880 128 aa11.01□□□□□ -0.65
USH1C-201ENST00000005226 GAS8-AS1O95177 125 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms