RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Cml1Q9JIZ0 222 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Gm9573F7C950 1606 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Gm20422E9PUR3 255 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 P01674 108 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Timp1P12032 205 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 CebpgP53568 150 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Gm6760Q0ZNK3 87 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Pate2Q3UW31 111 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Vmn1r233Q8R294 319 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Olfr1265Q8VEZ3 309 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Pbp2Q8VIN1 187 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Ube2cQ9D1C1 179 aa14.97□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Plxnb1Q8CJH3 2119 aa14.96□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Slc46a1Q6PEM8 459 aa14.96□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Fbxw26Q8BI58 466 aa14.96□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Nrn1Q8CFV4 142 aa14.96□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Fam110cQ8VE94 421 aa14.96□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 Ms4a6cQ99N08 217 aa14.96□□□□□ -0.01
Sqstm1-201ENSMUST00000015981 H60bB1B212 251 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr779E9PUS9 130 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gm6594J3QM43 95 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Tnfsf11O35235 316 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 P06323 132 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gabra6P16305 453 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Rac3P60764 192 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Znf260Q62513 407 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Hapln4Q80WM4 400 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Q9DAA3 117 aa14.96□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr1328B1ARV2 313 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Tmem139E9PX92 214 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr624F8VQI7 308 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Fbxl7Q5BJ29 491 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Prss3Q792Z0 246 aaKnown RBP14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Dtx2Q8R3P2 619 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Mettl21AQ9CQL0 218 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Prr12E9PYL2 2035 aaKnown RBP14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Zfp972A2AW65 139 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gm44501A8R0T9 150 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Rnf212F6TQD1 307 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 S100a10P08207 97 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Fgf2P15655 154 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 9030612E09RikQ8CE20 140 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Vmn1r89Q8R256 316 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Vps25Q9CQ80 176 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Dusp13Q9QYJ7 198 aa14.95□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr1016A2ASV2 309 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Adamts17E9Q4D1 1122 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gm20877J3QPZ4 227 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Tnfsf8P32972 239 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Rhbdd1Q8BHC7 315 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr945Q9EQB5 319 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 PpbpQ9EQI5 113 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gpa33Q9JKA5 319 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Dock9Q8BIK4 2055 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Ranbp2Q9ERU9 3053 aaKnown RBP14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 DmdP11531 3678 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Trav6-1A0A075B5Z8 112 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 PpoxP51175 477 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr124Q8VGW6 315 aa14.94□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Ighv1-18A0A0A6YXN4 117 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 1700025C18RikA2A580 89 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gm21244J3QK38 227 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 G6pcP35576 357 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Nxph1Q61200 271 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Psg16Q8K0U8 395 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr344Q8VFP9 309 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Epdr1Q99M71 224 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 PigcQ9CXR4 297 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Tax1bp3Q9DBG9 124 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Mmp1aQ9EPL5 464 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Chst5Q9QUP4 395 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gm14412A2ARR7 526 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr920E9Q413 310 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 P01659 112 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Jsrp1Q3MI48 332 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gm10803Q3TZS6 135 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 NppcQ61839 126 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Isg15Q64339 161 aaKnown RBP14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Opn5Q6VZZ7 377 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Tas2r114Q7M722 309 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Rnf2Q9CQJ4 336 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Fkbp11Q9D1M7 201 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Sumo3Q9Z172 110 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Col5a1O88207 1838 aa14.93□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Gm14325A2AW67 498 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Mtco2P00405 227 aaKnown RBP14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Rbx1P62878 108 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Zfp872Q3UVL3 465 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Klk1b21Q61759 261 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Prickle3Q80VL3 624 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Zdhhc25Q810M4 279 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Fbxo46Q8BG80 603 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Fam174bQ8K064 153 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Sdk2Q6V4S5 2176 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Igkv4-50A0A0B4J1J0 117 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Foxf2O54743 446 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Sumo1P63166 101 aaKnown RBP14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Smad4P97471 551 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 PkibQ04758 92 aa14.92□□□□□ -0.02
Sqstm1-201ENSMUST00000015981 Olfr1371Q7TQT7 311 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms