RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 RNF5Q99942 180 aa10.44□□□□□ -0.74
HLA-C-210ENST00000640219 ZNF430Q9H8G1 570 aaPredicted RBP10.44□□□□□ -0.74
HLA-C-210ENST00000640219 ZNF580Q9UK33 172 aa10.44□□□□□ -0.74
HLA-C-210ENST00000640219 URGCP-MRPS24S4R325 110 aa10.44□□□□□ -0.74
HLA-C-210ENST00000640219 TRBV24-1A0A075B6N3 115 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 IGHV4OR15-8A0A075B7B6 117 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 A0A087WW49 117 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 TGIF2-C20orf24A0A0A6YYL0 155 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 LINC01619G3V211 115 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 H7BYZ3 331 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 CXCL1P09341 107 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 CD81P60033 236 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 SPINK9Q5DT21 86 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 ZNF343Q6P1L6 599 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 RPUSD4Q96CM3 377 aaKnown RBP10.43□□□□□ -0.74
HLA-C-210ENST00000640219 ZNF355PQ9NSJ1 428 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 TMEM140Q9NV12 185 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 PRNDQ9UKY0 176 aa10.43□□□□□ -0.74
HLA-C-210ENST00000640219 HECTD4Q9Y4D8 3996 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 E7EUB6 86 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 TRGV3P03979 118 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 LGALS7P47929 136 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 HSPE1P61604 102 aaKnown RBP10.42□□□□□ -0.74
HLA-C-210ENST00000640219 PRSS8Q16651 343 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 VMA21Q3ZAQ7 101 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 KCNIP4Q6PIL6 250 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 NPVFQ9HCQ7 196 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 FKBP11Q9NYL4 201 aa10.42□□□□□ -0.74
HLA-C-210ENST00000640219 TRAV3A0A0B4J244 114 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 FNDC10F2Z333 226 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 PPP1R2P9O14990 202 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 PAGE4O60829 102 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 CXorf1O96002 111 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 SRSF12Q8WXF0 261 aaKnown RBP10.41□□□□□ -0.74
HLA-C-210ENST00000640219 SRD5A3Q9H8P0 318 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 NIT2Q9NQR4 276 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 DOK5Q9P104 306 aa10.41□□□□□ -0.74
HLA-C-210ENST00000640219 DNAH10Q8IVF4 4471 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 C15orf61A6NNL5 157 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 C11orf94C9JXX5 98 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
HLA-C-210ENST00000640219 CLN5O75503 358 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 TRBV12-3P01733 135 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 TRGC2P03986 189 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 GALR1P47211 349 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 RHOBP62745 196 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 RPL23P62829 140 aaKnown RBP10.4□□□□□ -0.74
HLA-C-210ENST00000640219 CST9LP1Q5W188 147 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 SLC16A13Q7RTY0 426 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 TEX45Q8NA69 505 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 OSR1Q8TAX0 266 aaPredicted RBP10.4□□□□□ -0.74
HLA-C-210ENST00000640219 ELOVL1Q9BW60 279 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 PARLQ9H300 379 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 OR51M1Q9H341 326 aa10.4□□□□□ -0.74
HLA-C-210ENST00000640219 KMT2AQ03164 3969 aa10.4□□□□□ -0.75
HLA-C-210ENST00000640219 BRI3O95415 125 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 REG1AP05451 166 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 FABP1P07148 127 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
HLA-C-210ENST00000640219 NPY1RP25929 384 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 POU2AF1Q16633 256 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 TEPPQ6URK8 271 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 RHOVQ96L33 236 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 OR51B2Q9Y5P1 312 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 PXMP4Q9Y6I8 212 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 S4R3C0 116 aa10.39□□□□□ -0.75
HLA-C-210ENST00000640219 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 PPP5D1E7EU14 171 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 IL6RP08887 468 aaPredicted RBP10.38□□□□□ -0.75
HLA-C-210ENST00000640219 OR4A47Q6IF82 309 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 GTSCR1Q86UQ5 136 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 SLC24A4Q8NFF2 622 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 PLEKHA3Q9HB20 300 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 ZNF257Q9Y2Q1 563 aa10.38□□□□□ -0.75
HLA-C-210ENST00000640219 CGB1A6NKQ9 187 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 UPK2O00526 184 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BKO60814 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 YIF1AO95070 293 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BJP06899 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 PFN1P07737 140 aaKnown RBP10.37□□□□□ -0.75
HLA-C-210ENST00000640219 TRGC1P0CF51 173 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 AREGP15514 252 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BOP23527 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BBP33778 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BDP58876 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 B2MP61769 119 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BCP62807 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST2H2BEQ16778 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BHQ93079 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 IMMP2LQ96T52 175 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BNQ99877 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HIST1H2BMQ99879 126 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 HINT2Q9BX68 163 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 TMEM14BQ9NUH8 114 aa10.37□□□□□ -0.75
HLA-C-210ENST00000640219 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms