RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 IGHG4P01861 327 aa16.76■□□□□ 0.27
SCARB2-212ENST00000638663 C2CD4CQ8TF44 421 aa16.76■□□□□ 0.27
SCARB2-212ENST00000638663 PGPA6NDG6 321 aa16.76■□□□□ 0.27
SCARB2-212ENST00000638663 MRPS12O15235 138 aaKnown RBP16.76■□□□□ 0.27
SCARB2-212ENST00000638663 LINC01551Q86U37 167 aa16.76■□□□□ 0.27
SCARB2-212ENST00000638663 NOTCH2Q04721 2471 aa16.76■□□□□ 0.27
SCARB2-212ENST00000638663 A0A0G2JLM5 398 aa16.75■□□□□ 0.27
SCARB2-212ENST00000638663 HELTA6NFD8 242 aa16.75■□□□□ 0.27
SCARB2-212ENST00000638663 IGLC2P0DOY2 106 aa16.75■□□□□ 0.27
SCARB2-212ENST00000638663 RPL15P61313 204 aaKnown RBP16.75■□□□□ 0.27
SCARB2-212ENST00000638663 RNF212Q495C1 297 aa16.75■□□□□ 0.27
SCARB2-212ENST00000638663 OR4X2Q8NGF9 303 aa16.75■□□□□ 0.27
SCARB2-212ENST00000638663 C17orf77Q96MU5 243 aa16.75■□□□□ 0.27
SCARB2-212ENST00000638663 Q9H3A6 140 aa16.75■□□□□ 0.27
SCARB2-212ENST00000638663 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.74■□□□□ 0.27
SCARB2-212ENST00000638663 SLC25A5P05141 298 aaKnown RBP16.74■□□□□ 0.27
SCARB2-212ENST00000638663 HNF1AP20823 631 aa16.74■□□□□ 0.27
SCARB2-212ENST00000638663 PSMB8P28062 276 aa16.74■□□□□ 0.27
SCARB2-212ENST00000638663 GNG5P63218 68 aa16.74■□□□□ 0.27
SCARB2-212ENST00000638663 TUBA4BQ9H853 241 aa16.74■□□□□ 0.27
SCARB2-212ENST00000638663 TRBV19A0A075B6N1 114 aa16.74■□□□□ 0.27
SCARB2-212ENST00000638663 TMEM86BQ8N661 226 aa16.74■□□□□ 0.27
SCARB2-212ENST00000638663 CLPSL1A2RUU4 121 aa16.73■□□□□ 0.27
SCARB2-212ENST00000638663 PEX7O00628 323 aa16.73■□□□□ 0.27
SCARB2-212ENST00000638663 LINC00479Q96M42 142 aa16.73■□□□□ 0.27
SCARB2-212ENST00000638663 RNF24Q9Y225 148 aa16.73■□□□□ 0.27
SCARB2-212ENST00000638663 COLCA2A8K830 154 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 ZNF207O43670 478 aaKnown RBP16.72■□□□□ 0.27
SCARB2-212ENST00000638663 OR8I2Q8N0Y5 310 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 OCC1Q8TAD7 63 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 SMR3AQ99954 134 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 EPDR1Q9UM22 224 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 RPH3ALQ9UNE2 315 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 DNAJC9-AS1A6NH13 148 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 C9JCJ5 164 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 MT-ND4LP03901 98 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 S100A7P31151 101 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 CENPWQ5EE01 88 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 EXOC3-AS1Q8N2X6 119 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 C15orf54Q8N8G6 183 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 OR5B12Q96R08 314 aa16.72■□□□□ 0.27
SCARB2-212ENST00000638663 RPL7P18124 248 aaKnown RBP16.71■□□□□ 0.27
SCARB2-212ENST00000638663 GNG4P50150 75 aa16.71■□□□□ 0.27
SCARB2-212ENST00000638663 SLC35B1P78383 322 aa16.71■□□□□ 0.27
SCARB2-212ENST00000638663 FAM24BQ8N5W8 94 aa16.71■□□□□ 0.27
SCARB2-212ENST00000638663 HIST1H2BAQ96A08 127 aa16.71■□□□□ 0.27
SCARB2-212ENST00000638663 TCEAL7Q9BRU2 100 aa16.71■□□□□ 0.27
SCARB2-212ENST00000638663 OTORQ9NRC9 128 aa16.71■□□□□ 0.27
SCARB2-212ENST00000638663 TMEM89A2RUT3 159 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 SLC17A3O00476 420 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 CNN1P51911 297 aaKnown RBP16.7■□□□□ 0.26
SCARB2-212ENST00000638663 C5orf17Q8NAS9 161 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 IGHV3OR16-13A0A075B7E8 117 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 IGHV3-74A0A0B4J1X5 117 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 TRAV34A0A0B4J273 112 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 IGHV3-66A0A0C4DH42 116 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 TEX38Q6PEX7 206 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 Q8N2B8 174 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 METTL26Q96S19 204 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 CTDSP1Q9GZU7 261 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 TMEM242Q9NWH2 141 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 PRELID1Q9Y255 219 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 URGCP-MRPS24S4R325 110 aa16.7■□□□□ 0.26
SCARB2-212ENST00000638663 IGHV3-49A0A0A0MS15 119 aa16.69■□□□□ 0.26
SCARB2-212ENST00000638663 BUB3O43684 328 aa16.69■□□□□ 0.26
SCARB2-212ENST00000638663 APOHP02749 345 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-212ENST00000638663 RPLP1P05386 114 aaKnown RBP16.69■□□□□ 0.26
SCARB2-212ENST00000638663 FAM181BA6NEQ2 426 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 CLDN34H7C241 214 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 K7EN84 100 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 UNQ9165/PRO28630Q6UXU0 137 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 SIGLEC15Q6ZMC9 328 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 IGF2BP2-AS1Q96M15 143 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 ESM1Q9NQ30 184 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 SMAD5-AS1Q9Y6J3 95 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 CXorf65A6NEN9 183 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 NDUFA4O00483 81 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 SERTAD4Q9NUC0 356 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 CDC42EP3Q9UKI2 254 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 LY96Q9Y6Y9 160 aa16.68■□□□□ 0.26
SCARB2-212ENST00000638663 H7BYZ3 331 aa16.67■□□□□ 0.26
SCARB2-212ENST00000638663 TAS2R60P59551 318 aa16.67■□□□□ 0.26
SCARB2-212ENST00000638663 FOXE3Q13461 319 aa16.67■□□□□ 0.26
SCARB2-212ENST00000638663 CMTM2Q8TAZ6 248 aa16.67■□□□□ 0.26
SCARB2-212ENST00000638663 YPEL4Q96NS1 127 aa16.67■□□□□ 0.26
SCARB2-212ENST00000638663 ATG101Q9BSB4 218 aa16.67■□□□□ 0.26
SCARB2-212ENST00000638663 PEF1Q9UBV8 284 aaKnown RBP16.67■□□□□ 0.26
SCARB2-212ENST00000638663 ISLRO14498 428 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 GGCTO75223 188 aaKnown RBP16.66■□□□□ 0.26
SCARB2-212ENST00000638663 TCRAP04437 139 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 ATF4P18848 351 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-212ENST00000638663 PDE6HQ13956 83 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 FAM209BQ5JX69 171 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 LYPD1Q8N2G4 141 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 ANAPC16Q96DE5 110 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 SGK494Q96LW2 274 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 ELANEP08246 267 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 ELOBQ15370 118 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 SFRP2Q96HF1 295 aa16.66■□□□□ 0.26
SCARB2-212ENST00000638663 U3KQE9 123 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms