RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 EIF5A2Q9GZV4 153 aaKnown RBP5.87□□□□□ -1.47
SCARB2-209ENST00000638409 SPANXB1Q9NS25 103 aaPredicted RBP5.87□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF581Q9P0T4 197 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 RFNGQ9Y644 331 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 UMAD1C9J7I0 102 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 C12orf77C9JDV5 145 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 OR13C7P0DN81 318 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 GABRR1P24046 479 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 SNCAP37840 140 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 RBM11P57052 281 aaKnown RBP5.87□□□□□ -1.47
SCARB2-209ENST00000638409 TAS2R46P59540 309 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 MPV17LQ2QL34 196 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 C6orf201Q7Z4U5 140 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 TMEM144Q7Z5S9 345 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 OR10D4PQ8NGN7 298 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 SCRT1Q9BWW7 348 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 SMPXQ9UHP9 88 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 VAX2Q9UIW0 290 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 RPUSD1Q9UJJ7 312 aaKnown RBP5.87□□□□□ -1.47
SCARB2-209ENST00000638409 MED13LQ71F56 2210 aa5.87□□□□□ -1.47
SCARB2-209ENST00000638409 A0A1B0GV72 72 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 OR2H2O95918 312 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 TFF1P04155 84 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 REG1AP05451 166 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 PPP1CCP36873 323 aaKnown RBP5.86□□□□□ -1.47
SCARB2-209ENST00000638409 ERVK-16P61578 105 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF575Q86XF7 245 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 TEX29Q8N6K0 151 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 OR10G7Q8NGN6 311 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 FAM19A4Q96LR4 140 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 OR1A1Q9P1Q5 309 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 A0A1W2PS18 150 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 FOXI3A8MTJ6 420 aaPredicted RBP5.86□□□□□ -1.47
SCARB2-209ENST00000638409 DEGS1O15121 323 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 LINC00614P0C842 121 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 VDAC2P45880 294 aaPredicted RBP5.86□□□□□ -1.47
SCARB2-209ENST00000638409 SULT1A1P50225 295 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 ANXA10Q9UJ72 324 aa5.86□□□□□ -1.47
SCARB2-209ENST00000638409 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
SCARB2-209ENST00000638409 IGHV4-4A0A075B6R2 117 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 PRH1P02810 166 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 CT45A10P0DMU9 189 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 TSPOP30536 169 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 MEF2CQ06413 473 aaPredicted RBP5.85□□□□□ -1.47
SCARB2-209ENST00000638409 PIGYQ3MUY2 71 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 DNLZQ5SXM8 178 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 IL22RA2Q969J5 263 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCARB2-209ENST00000638409 DNAJC9-AS1A6NH13 148 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 CRYM-AS1A6NIL9 109 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 A8MWP6 167 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 GEMIN2O14893 280 aaKnown RBP5.85□□□□□ -1.47
SCARB2-209ENST00000638409 FSHBP01225 129 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 IFNA21P01568 189 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 FXYD4P59646 89 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 HMGN3Q15651 99 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 SGPP2Q8IWX5 399 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 OR1P1Q8NH06 330 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 FAM213BQ8TBF2 198 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 ACANP16112 2415 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 F8P00451 2351 aa5.85□□□□□ -1.47
SCARB2-209ENST00000638409 ZNF727A8MUV8 499 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 M0R1W7 72 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 RBP4P02753 201 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 OR5AC1P0C628 307 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 OR5H8P0DN80 308 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 PIGPP57054 158 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 RBX1P62877 108 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 LYZL2Q7Z4W2 148 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 OR9G1Q8NH87 305 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 CTSDP07339 412 aaPredicted RBP5.84□□□□□ -1.47
SCARB2-209ENST00000638409 MYCNOSP40205 109 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 NDUFA6P56556 154 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 C17orf58Q2M2W7 97 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 SUMF2Q8NBJ7 301 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 FAAP24Q9BTP7 215 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 DOCK11Q5JSL3 2073 aa5.84□□□□□ -1.47
SCARB2-209ENST00000638409 BORCS7-ASMTA0A0B4J1R7 106 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 SELENOTP62341 195 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 CCL20P78556 96 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 TAF9Q16594 264 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 SLC35E4Q6ICL7 350 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 LCN12Q6JVE5 192 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF343Q6P1L6 599 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 C11orf42Q8N5U0 333 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 H1FXQ92522 213 aaKnown RBP5.84□□□□□ -1.48
SCARB2-209ENST00000638409 MALSU1Q96EH3 234 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 GINS3Q9BRX5 216 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 SNHG12Q9BXW3 62 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 AK3Q9UIJ7 227 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 LINC00312Q9Y6C7 94 aa5.84□□□□□ -1.48
SCARB2-209ENST00000638409 MALRD1Q5VYJ5 2156 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 ABCA1O95477 2261 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 hADV38S2A0JD32 116 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 C17orf98A8MV24 154 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 OR7C1O76099 320 aaPredicted RBP5.83□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF728P0DKX0 622 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 RPS10P46783 165 aaKnown RBP5.83□□□□□ -1.48
SCARB2-209ENST00000638409 RHEBQ15382 184 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms