RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 CHCHD5Q9BSY4 110 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 ACACBO00763 2458 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 PLXNA4Q9HCM2 1894 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 IGHG3P01860 377 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 GPHA2Q96T91 129 aa12.57□□□□□ -0.4
UBE3A-227ENST00000638011 TRAV41A0A0B4J266 112 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 IGHV1OR15-9A0A0B4J2B8 117 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 INSP01308 110 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 PDLIM4P50479 330 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 Q6ZS52 159 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 BHLHA9Q7RTU4 235 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 CCL21O00585 134 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 TMEM240Q5SV17 173 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 IGHV1-45A0A0A0MS14 117 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 CTHRC1Q96CG8 243 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 SRSF8Q9BRL6 282 aaKnown RBP12.56□□□□□ -0.4
UBE3A-227ENST00000638011 REPIN1Q9BWE0 567 aaKnown RBP12.56□□□□□ -0.4
UBE3A-227ENST00000638011 C17orf98A8MV24 154 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 ZNF138P52744 262 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 TANC1Q9C0D5 1861 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 IGKV3-20P01619 116 aa12.56□□□□□ -0.4
UBE3A-227ENST00000638011 SS18Q15532 418 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 ZNF826PQ6ZT77 177 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.55□□□□□ -0.4
UBE3A-227ENST00000638011 KNCNA6PVL3 124 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 EFEMP2O95967 443 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 NEU4Q8WWR8 484 aaPredicted RBP12.55□□□□□ -0.4
UBE3A-227ENST00000638011 IGKV1D-33P01593 117 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 IGKV1-33P01594 117 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 RAMP3O60896 148 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 AMELYQ99218 206 aa12.55□□□□□ -0.4
UBE3A-227ENST00000638011 ETDBQ3ZM63 59 aa12.54□□□□□ -0.4
UBE3A-227ENST00000638011 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
UBE3A-227ENST00000638011 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
UBE3A-227ENST00000638011 IGHV3-48P01763 117 aa12.54□□□□□ -0.4
UBE3A-227ENST00000638011 MRPL14Q6P1L8 145 aaKnown RBP12.54□□□□□ -0.4
UBE3A-227ENST00000638011 CEND1Q8N111 149 aa12.54□□□□□ -0.4
UBE3A-227ENST00000638011 TNRC6BQ9UPQ9 1833 aaKnown RBP12.54□□□□□ -0.4
UBE3A-227ENST00000638011 FOXS1O43638 330 aa12.54□□□□□ -0.4
UBE3A-227ENST00000638011 APOBEC3AP31941 199 aaPredicted RBP12.54□□□□□ -0.4
UBE3A-227ENST00000638011 TRBV7-1A0A0A6YYK4 115 aa12.53□□□□□ -0.4
UBE3A-227ENST00000638011 TMEM256Q8N2U0 113 aa12.53□□□□□ -0.4
UBE3A-227ENST00000638011 GNG5P63218 68 aa12.53□□□□□ -0.4
UBE3A-227ENST00000638011 SAA2-SAA4A0A096LPE2 208 aa12.53□□□□□ -0.4
UBE3A-227ENST00000638011 SAA2P0DJI9 122 aaPredicted RBP12.53□□□□□ -0.4
UBE3A-227ENST00000638011 CFPP27918 469 aa12.53□□□□□ -0.4
UBE3A-227ENST00000638011 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
UBE3A-227ENST00000638011 TMEM75Q8N9X5 138 aa12.53□□□□□ -0.4
UBE3A-227ENST00000638011 POLR3KQ9Y2Y1 108 aaPredicted RBP12.53□□□□□ -0.4
UBE3A-227ENST00000638011 LILRA1O75019 489 aa12.52□□□□□ -0.4
UBE3A-227ENST00000638011 FGF6P10767 208 aa12.52□□□□□ -0.4
UBE3A-227ENST00000638011 PKIGQ9Y2B9 76 aa12.52□□□□□ -0.41
UBE3A-227ENST00000638011 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
UBE3A-227ENST00000638011 BVES-AS1Q5T3Y7 98 aa12.52□□□□□ -0.41
UBE3A-227ENST00000638011 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
UBE3A-227ENST00000638011 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
UBE3A-227ENST00000638011 DTX4Q9Y2E6 619 aa12.52□□□□□ -0.41
UBE3A-227ENST00000638011 C1orf122Q6ZSJ8 110 aa12.52□□□□□ -0.41
UBE3A-227ENST00000638011 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 IGHV3-64A0A075B6Q5 118 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 PRR7Q8TB68 274 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 NPIPB5A8MRT5 1133 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 C2CD4DB7Z1M9 353 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 RHODO00212 210 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 FHL5Q5TD97 284 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 ZNRF1Q8ND25 227 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 MRPS18CQ9Y3D5 142 aaKnown RBP12.51□□□□□ -0.41
UBE3A-227ENST00000638011 LGALS9BQ3B8N2 356 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 MORN2Q502X0 79 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 LGALS9CQ6DKI2 356 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 KLRD1Q13241 179 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 ATG2AQ2TAZ0 1938 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 IGLC2P0DOY2 106 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 IGLC3P0DOY3 106 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 RNF5Q99942 180 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 RFNGQ9Y644 331 aa12.51□□□□□ -0.41
UBE3A-227ENST00000638011 COL18A1P39060 1754 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 STPG4Q8N801 248 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 PAX8Q06710 450 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
UBE3A-227ENST00000638011 CCL19Q99731 98 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 CLEC19AQ6UXS0 136 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 B5MCH6 92 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 IGKV1-8A0A0C4DH67 115 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 CENPVL1A0A0U1RR11 272 aa12.5□□□□□ -0.41
UBE3A-227ENST00000638011 ZNF501Q96CX3 271 aaPredicted RBP12.49□□□□□ -0.41
UBE3A-227ENST00000638011 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 LILRA6Q6PI73 481 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 NUP210LQ5VU65 1888 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 F6UB75 175 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 EREGO14944 169 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 GLMPQ8WWB7 406 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 NPSP0C0P6 89 aa12.49□□□□□ -0.41
UBE3A-227ENST00000638011 CD33P20138 364 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms