RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 ADCYAP1P18509 176 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 WIPF2Q8TF74 440 aaPredicted RBP11.83□□□□□ -0.52
CLN6-219ENST00000637329 WFDC12Q8WWY7 111 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 FXYD5Q96DB9 178 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
CLN6-219ENST00000637329 ZNF98A6NK75 572 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 FAM74A7A6NL05 159 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 F6UZH7 168 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 OR10J4P0C629 311 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 CD81P60033 236 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 C10orf99Q6UWK7 81 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 LCNL1Q6ZST4 164 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 OR4F17Q8NGA8 305 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 OR4F5Q8NH21 305 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 GPR82Q96P67 336 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 OR4F4Q96R69 305 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 METTL26Q96S19 204 aa11.82□□□□□ -0.52
CLN6-219ENST00000637329 YTHDF2Q9Y5A9 579 aaKnown RBP11.82□□□□□ -0.52
CLN6-219ENST00000637329 TRBV12-3P01733 135 aa11.81□□□□□ -0.52
CLN6-219ENST00000637329 PYYP10082 97 aa11.81□□□□□ -0.52
CLN6-219ENST00000637329 HIST1H1EP10412 219 aaKnown RBP11.81□□□□□ -0.52
CLN6-219ENST00000637329 RPL7P18124 248 aaKnown RBP11.81□□□□□ -0.52
CLN6-219ENST00000637329 UBE2G2P60604 165 aa11.81□□□□□ -0.52
CLN6-219ENST00000637329 C1orf194Q5T5A4 169 aa11.81□□□□□ -0.52
CLN6-219ENST00000637329 CYB561D1Q8N8Q1 229 aa11.81□□□□□ -0.52
CLN6-219ENST00000637329 CLPSL1A2RUU4 121 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 CRYBB3P26998 211 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 CDX1P47902 265 aaPredicted RBP11.8□□□□□ -0.52
CLN6-219ENST00000637329 PDE6HQ13956 83 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 SOHLH1Q5JUK2 328 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 CST9LP1Q5W188 147 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 LEMD1Q68G75 181 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 SVBPQ8N300 66 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
CLN6-219ENST00000637329 IGHV3-35A0A0C4DH35 117 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 MRPS12O15235 138 aaKnown RBP11.79□□□□□ -0.52
CLN6-219ENST00000637329 NBEAP1P0C6P0 100 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 IGLC2P0DOY2 106 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 NPPCP23582 126 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 ATP5G3P48201 142 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 FAM74A3Q4VXF1 159 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 GPHB5Q86YW7 130 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 CCDC28AQ8IWP9 274 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 LINC01006Q8NI28 216 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 C11orf52Q96A22 123 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 U3KQE9 123 aa11.79□□□□□ -0.52
CLN6-219ENST00000637329 GGTLC3B5MD39 225 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 BUB3O43684 328 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 APOC3P02656 99 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 MEOX2P50222 304 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 FAM106AQ4KMX7 169 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 FAM90A2PQ658T7 463 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 REC114Q7Z4M0 266 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 LYPD1Q8N2G4 141 aa11.78□□□□□ -0.52
CLN6-219ENST00000637329 A0A087X0K7 114 aa11.77□□□□□ -0.53
CLN6-219ENST00000637329 K7EMT4 169 aa11.77□□□□□ -0.53
CLN6-219ENST00000637329 WIPF1O43516 503 aa11.77□□□□□ -0.53
CLN6-219ENST00000637329 RPEL1Q2QD12 228 aa11.77□□□□□ -0.53
CLN6-219ENST00000637329 RPUSD4Q96CM3 377 aaKnown RBP11.77□□□□□ -0.53
CLN6-219ENST00000637329 NIPSNAP3BQ9BS92 247 aa11.77□□□□□ -0.53
CLN6-219ENST00000637329 C20orf24Q9BUV8 137 aa11.77□□□□□ -0.53
CLN6-219ENST00000637329 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.53
CLN6-219ENST00000637329 UFC1Q9Y3C8 167 aa11.77□□□□□ -0.53
CLN6-219ENST00000637329 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 A8MWP6 167 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 LGALS9O00182 355 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 ZNF253O75346 499 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 SNAPINO95295 136 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 BMI1P35226 326 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 MYCNOSP40205 109 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 GALR1P47211 349 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 UNQ9165/PRO28630Q6UXU0 137 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 OR8I2Q8N0Y5 310 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 OR5B12Q96R08 314 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 ELOVL1Q9BW60 279 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 CUBNO60494 3623 aa11.76□□□□□ -0.53
CLN6-219ENST00000637329 A0A1B0GUS0 222 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 SCO2A0A1W2PP80 73 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 A0A1W2PS18 150 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
CLN6-219ENST00000637329 CEBPGP53567 150 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 PNRC1Q12796 327 aaPredicted RBP11.75□□□□□ -0.53
CLN6-219ENST00000637329 TCTEX1D4Q5JR98 221 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 SMIM7Q9BQ49 75 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 PARLQ9H300 379 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
CLN6-219ENST00000637329 IGHV3OR16-8A0A075B7F1 116 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 H3BQ15 152 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 GUCA2BQ16661 112 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 C16orf54Q6UWD8 224 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 Q9H3A6 140 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 RNF114Q9Y508 228 aa11.74□□□□□ -0.53
CLN6-219ENST00000637329 IGHV4OR15-8A0A075B7B6 117 aa11.73□□□□□ -0.53
CLN6-219ENST00000637329 A0A087WW49 117 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms