RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 C8orf46Q8TAG6 207 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 TIMM9Q9Y5J7 89 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 HILPDAQ9Y5L2 63 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 IGHV1-3A0A0C4DH29 117 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 PRSS46E5RG02 174 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 Q0VG73 95 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 VWC2Q2TAL6 325 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 TREML4Q6UXN2 200 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 RPEQ96AT9 228 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 SAMD10Q9BYL1 202 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 SETD2Q9BYW2 2564 aaPredicted RBP9.21□□□□□ -0.93
CLN6-217ENST00000636964 DOPEY1Q5JWR5 2465 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 OR2T8A6NH00 312 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 CD24P25063 80 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 EFNA4P52798 201 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 BAGE3Q86Y29 109 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 BAGE2Q86Y30 109 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 OCC1Q8TAD7 63 aa9.21□□□□□ -0.93
CLN6-217ENST00000636964 PTPN13Q12923 2485 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 ABCA12Q86UK0 2595 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 NAV3Q8IVL0 2385 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 A0A1W2PS18 150 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
CLN6-217ENST00000636964 PRR31Q5SQ13 230 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 LCN12Q6JVE5 192 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 SSMEM1Q8WWF3 244 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 RNF183Q96D59 192 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 WDR83OSQ9Y284 106 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 ZNF257Q9Y2Q1 563 aa9.21□□□□□ -0.94
CLN6-217ENST00000636964 F8WDY8 70 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 HSD52Q0P140 79 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 PTH2Q96A98 100 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 ASCL2Q99929 193 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 BPESC1Q9GZL8 116 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 VPREB3Q9UKI3 123 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 CCDC168Q8NDH2 2452 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 VPS13CQ709C8 3753 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 REG1AP05451 166 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 IER3P46695 156 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 MIC13Q5XKP0 118 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 MRPL27Q9P0M9 148 aaKnown RBP9.2□□□□□ -0.94
CLN6-217ENST00000636964 HSPB8Q9UJY1 196 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 CSMD2Q7Z408 3487 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 ZNF207O43670 478 aaKnown RBP9.2□□□□□ -0.94
CLN6-217ENST00000636964 IGHV3-48P01763 117 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 USF1P22415 310 aaPredicted RBP9.2□□□□□ -0.94
CLN6-217ENST00000636964 LGALS4P56470 323 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 OR5B3Q8NH48 314 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 TMEM167AQ8TBQ9 72 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 C1orf159Q96HA4 380 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 MGST2Q99735 147 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 NDUFA4L2Q9NRX3 87 aa9.2□□□□□ -0.94
CLN6-217ENST00000636964 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 IGLC7A0M8Q6 106 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 CGB1A6NKQ9 187 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 VMA21Q3ZAQ7 101 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 FAM19A2Q8N3H0 131 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 SIGLECL1Q8N7X8 197 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 OR1L8Q8NGR8 309 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 CHRDL1Q9BU40 450 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 PPDPFQ9H3Y8 114 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 GAGE10A6NGK3 116 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 C17orf112F2Z3M2 114 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 VSTM2AQ8TAG5 236 aa9.19□□□□□ -0.94
CLN6-217ENST00000636964 FCN1O00602 326 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 PMCHP20382 165 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 RPL24P83731 157 aaKnown RBP9.18□□□□□ -0.94
CLN6-217ENST00000636964 WT1-ASQ06250 92 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 SPATA12Q7Z6I5 190 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 C19orf24Q9BVV8 132 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 NPVFQ9HCQ7 196 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 SNURFLB1AK76 121 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 TIMM23O14925 209 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 WIPF1O43516 503 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 RBP4P02753 201 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 RNASE2P10153 161 aaKnown RBP9.18□□□□□ -0.94
CLN6-217ENST00000636964 TNXAQ16473 311 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 MRGPRG-AS1Q2M3A8 158 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 C19orf35Q6ZS72 473 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 DUX5Q96PT3 197 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 FBXL15Q9H469 300 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 ZNF253O75346 499 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 IGHV4-39P01824 125 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 HTR1DP28221 377 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 ZNF90Q03938 601 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 HCP5Q6MZN7 132 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 VMO1Q7Z5L0 202 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 RNF125Q96EQ8 232 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 GGTLC1Q9BX51 225 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 IL36BQ9NZH7 164 aa9.18□□□□□ -0.94
CLN6-217ENST00000636964 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
CLN6-217ENST00000636964 MDFIC2A0A1B0GVS7 189 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
CLN6-217ENST00000636964 ERHP84090 104 aaKnown RBP9.17□□□□□ -0.94
CLN6-217ENST00000636964 MRPL16Q9NX20 251 aaKnown RBP9.17□□□□□ -0.94
CLN6-217ENST00000636964 AMMECR1Q9Y4X0 333 aaPredicted RBP9.17□□□□□ -0.94
CLN6-217ENST00000636964 A0A1W2PPI3 338 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms