RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 SGK494Q96LW2 274 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 PRELID1Q9Y255 219 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 TRBV7-1A0A0A6YYK4 115 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 IGLC2P0DOY2 106 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 GALR1P47211 349 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 C9orf139Q6ZV77 190 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 NHLRC2Q8NBF2 726 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 SFRP2Q96HF1 295 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 IGF2BP2-AS1Q96M15 143 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 ZFAND3Q9H8U3 227 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 BIN3Q9NQY0 253 aa12.29□□□□□ -0.44
CACNA1A-231ENST00000636816 TLN2Q9Y4G6 2542 aa12.28□□□□□ -0.44
CACNA1A-231ENST00000636816 AP4M1O00189 453 aa12.28□□□□□ -0.44
CACNA1A-231ENST00000636816 ISLRO14498 428 aa12.28□□□□□ -0.44
CACNA1A-231ENST00000636816 TGOLN2O43493 480 aa12.28□□□□□ -0.44
CACNA1A-231ENST00000636816 RPL15P61313 204 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-231ENST00000636816 TEX38Q6PEX7 206 aa12.28□□□□□ -0.44
CACNA1A-231ENST00000636816 FAM223BA6NKX1 122 aa12.27□□□□□ -0.44
CACNA1A-231ENST00000636816 SLC17A3O00476 420 aa12.27□□□□□ -0.44
CACNA1A-231ENST00000636816 SCGB2A1O75556 95 aa12.27□□□□□ -0.44
CACNA1A-231ENST00000636816 TRBV12-3P01733 135 aa12.27□□□□□ -0.44
CACNA1A-231ENST00000636816 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.44
CACNA1A-231ENST00000636816 FAM223AQ8IWN6 122 aa12.27□□□□□ -0.44
CACNA1A-231ENST00000636816 RABAC1Q9UI14 185 aa12.27□□□□□ -0.44
CACNA1A-231ENST00000636816 TRBV19A0A075B6N1 114 aa12.27□□□□□ -0.45
CACNA1A-231ENST00000636816 HOXA3O43365 443 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-231ENST00000636816 PF4V1P10720 104 aa12.27□□□□□ -0.45
CACNA1A-231ENST00000636816 OR4F17Q8NGA8 305 aa12.27□□□□□ -0.45
CACNA1A-231ENST00000636816 SAV1Q9H4B6 383 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-231ENST00000636816 LY96Q9Y6Y9 160 aa12.27□□□□□ -0.45
CACNA1A-231ENST00000636816 FLNAP21333 2647 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 CLPSL1A2RUU4 121 aa12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 IGHV3-11P01762 117 aa12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 CNN1P51911 297 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 RAB5BP61020 215 aa12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 CFHR3Q02985 330 aa12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 C10orf99Q6UWK7 81 aa12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 FAM210BQ96KR6 192 aa12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 CDC42EP3Q9UKI2 254 aa12.26□□□□□ -0.45
CACNA1A-231ENST00000636816 UNC79Q9P2D8 2635 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 ZNF207O43670 478 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 IGLV1-40P01703 118 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 CD99P14209 185 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 OR10G8Q8NGN5 311 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 OR5R1Q8NH85 324 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 DUX5Q96PT3 197 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 OR5B12Q96R08 314 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 OTORQ9NRC9 128 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 GAR1Q9NY12 217 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 VPREB3Q9UKI3 123 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 SMAD5-AS1Q9Y6J3 95 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 IGHV3-66A0A0C4DH42 116 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 C1orf196B1AJZ1 125 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 BMPR1BO00238 502 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 APOHP02749 345 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 MGST1P10620 155 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 TAS2R60P59551 318 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 SIGLEC15Q6ZMC9 328 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 LINC00518Q8N0U6 118 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 C5orf17Q8NAS9 161 aa12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 RNASE7Q9H1E1 156 aaKnown RBP12.25□□□□□ -0.45
CACNA1A-231ENST00000636816 IGHV3OR16-13A0A075B7E8 117 aa12.24□□□□□ -0.45
CACNA1A-231ENST00000636816 IGHV3-49A0A0A0MS15 119 aa12.24□□□□□ -0.45
CACNA1A-231ENST00000636816 IGHV3-74A0A0B4J1X5 117 aa12.24□□□□□ -0.45
CACNA1A-231ENST00000636816 TCRAP04437 139 aa12.24□□□□□ -0.45
CACNA1A-231ENST00000636816 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
CACNA1A-231ENST00000636816 TRBV24-1A0A075B6N3 115 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 H3BUA1 57 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 BRI3O95415 125 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 GCGP01275 180 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 TMEM183BQ1AE95 376 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 BAGE2Q86Y30 109 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 OR8I2Q8N0Y5 310 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 PYGO2Q9BRQ0 406 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 ATG101Q9BSB4 218 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 KLF12Q9Y4X4 402 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 SONP18583 2426 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 A0A1W2PPQ1 181 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 PPP1R2P9O14990 202 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 S100PP25815 95 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 ARL3P36405 182 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 RAB9AP51151 201 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 ERVFC1-1P60608 527 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 Q71RC1 249 aaPredicted RBP12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 TCEAL7Q9BRU2 100 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 PRDM13Q9H4Q3 707 aa12.23□□□□□ -0.45
CACNA1A-231ENST00000636816 TRAV8-1A0A0A6YYK1 113 aa12.22□□□□□ -0.45
CACNA1A-231ENST00000636816 BUB3O43684 328 aa12.22□□□□□ -0.45
CACNA1A-231ENST00000636816 SRP14P37108 136 aaKnown RBP12.22□□□□□ -0.45
CACNA1A-231ENST00000636816 SIGLECL1Q8N7X8 197 aa12.22□□□□□ -0.45
CACNA1A-231ENST00000636816 USMG5Q96IX5 58 aa12.22□□□□□ -0.45
CACNA1A-231ENST00000636816 RNF24Q9Y225 148 aa12.22□□□□□ -0.45
CACNA1A-231ENST00000636816 M0R3E3 92 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 TRGC2P03986 189 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 UBE2G1P62253 170 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 KRTAP1-1Q07627 177 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 IGFL4Q6B9Z1 124 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms