RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ADMP35318 185 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 C15orf32Q32M92 178 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 TMEM68Q96MH6 324 aa15.34■□□□□ 0.05
CHRNA4-209ENST00000627000 RHOGP84095 191 aa15.33■□□□□ 0.04
CHRNA4-209ENST00000627000 LY6EQ16553 131 aa15.33■□□□□ 0.04
CHRNA4-209ENST00000627000 GFI1BQ5VTD9 330 aa15.33■□□□□ 0.04
CHRNA4-209ENST00000627000 BAGE2Q86Y30 109 aa15.33■□□□□ 0.04
CHRNA4-209ENST00000627000 EXOC3-AS1Q8N2X6 119 aa15.33■□□□□ 0.04
CHRNA4-209ENST00000627000 LINC00527Q9UJ94 153 aa15.33■□□□□ 0.04
CHRNA4-209ENST00000627000 IGHV3-35A0A0C4DH35 117 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 FABP4P15090 132 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 TMEM183BQ1AE95 376 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 MS4A10Q96PG2 267 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 OSTCQ9NRP0 149 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 ANKRD17O75179 2603 aaKnown RBP15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 DDTP30046 118 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 ACTL10Q5JWF8 245 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 BPIFA4PQ86YQ2 179 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 C5orf17Q8NAS9 161 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 MAPK1IP1LQ8NDC0 245 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 C14orf144Q96I85 54 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 PACRGQ96M98 296 aaPredicted RBP15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 POLQO75417 2590 aa15.32■□□□□ 0.04
CHRNA4-209ENST00000627000 A0A096LNT2 108 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 TRBV9A0A0B4J1U6 114 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 MRPS12O15235 138 aaKnown RBP15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 IGLC2P0DOY2 106 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 SLC25A16P16260 332 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 GPR183P32249 361 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 RPL15P61313 204 aaKnown RBP15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 IBA57Q5T440 356 aaKnown RBP15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 ZNF502Q8TBZ5 544 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 VN1R17PQ8TDU5 208 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 ZNF414Q96IQ9 312 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 ATG101Q9BSB4 218 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 IGHV3OR16-8A0A075B7F1 116 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 TCRAP04437 139 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 PRB4P10163 310 aaPredicted RBP15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 UBE2G1P62253 170 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 RPEL1Q2QD12 228 aa15.31■□□□□ 0.04
CHRNA4-209ENST00000627000 TRBV19A0A075B6N1 114 aa15.3■□□□□ 0.04
CHRNA4-209ENST00000627000 H3BUX3 64 aa15.3■□□□□ 0.04
CHRNA4-209ENST00000627000 KLK9Q2XQG4 91 aa15.3■□□□□ 0.04
CHRNA4-209ENST00000627000 OTORQ9NRC9 128 aa15.3■□□□□ 0.04
CHRNA4-209ENST00000627000 KLK9Q9UKQ9 250 aa15.3■□□□□ 0.04
CHRNA4-209ENST00000627000 KLF12Q9Y4X4 402 aa15.3■□□□□ 0.04
CHRNA4-209ENST00000627000 FRMD6-AS1P0C7T7 363 aa15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 PDZD11Q5EBL8 140 aa15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 TMEM183AQ8IXX5 376 aa15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 OR8I2Q8N0Y5 310 aa15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 OR4F17Q8NGA8 305 aa15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 TXN2Q99757 166 aa15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 SERTAD4Q9NUC0 356 aa15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 CA1P00915 261 aaPredicted RBP15.29■□□□□ 0.04
CHRNA4-209ENST00000627000 CLEC3BP05452 202 aa15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 TCL1AP56279 114 aa15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 PRR27Q6MZM9 219 aa15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 CCDC140Q96MF4 163 aa15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 TRAPPC1Q9Y5R8 145 aa15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 CENPEQ02224 2701 aa15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 BTF3L4Q96K17 158 aa15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 NOL4LQ96MY1 436 aaPredicted RBP15.28■□□□□ 0.04
CHRNA4-209ENST00000627000 TRAV8-1A0A0A6YYK1 113 aa15.27■□□□□ 0.04
CHRNA4-209ENST00000627000 TRAV41A0A0B4J266 112 aa15.27■□□□□ 0.04
CHRNA4-209ENST00000627000 A6NDX4 124 aa15.27■□□□□ 0.04
CHRNA4-209ENST00000627000 ZNF705GA8MUZ8 300 aaPredicted RBP15.27■□□□□ 0.04
CHRNA4-209ENST00000627000 CDPF1Q6NVV7 123 aa15.27■□□□□ 0.04
CHRNA4-209ENST00000627000 SIGLEC15Q6ZMC9 328 aa15.27■□□□□ 0.04
CHRNA4-209ENST00000627000 HIST1H2BLQ99880 126 aa15.27■□□□□ 0.04
CHRNA4-209ENST00000627000 SPINK4O60575 86 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 JOSD1Q15040 202 aaPredicted RBP15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 C19orf54Q5BKX5 351 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 CLEC19AQ6UXS0 136 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 Q71RC1 249 aaPredicted RBP15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 LINC01356Q8N9X3 169 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 GOLT1AQ6ZVE7 132 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 NUDT10Q8NFP7 164 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 CMTM2Q8TAZ6 248 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 NUDT11Q96G61 164 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 FMC1Q96HJ9 113 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 GPR82Q96P67 336 aa15.26■□□□□ 0.03
CHRNA4-209ENST00000627000 PTPN13Q12923 2485 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 SCGB2A1O75556 95 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 CBLN1P23435 193 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 RAB4BP61018 213 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 SLC35B1P78383 322 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 GNB4Q9HAV0 340 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 TRAV9-1A0A075B6T8 112 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 TOMM20LQ6UXN7 152 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 MLST8Q9BVC4 326 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 RABAC1Q9UI14 185 aa15.25■□□□□ 0.03
CHRNA4-209ENST00000627000 CSPG4Q6UVK1 2322 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 USP9YO00507 2555 aaPredicted RBP15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 RNF223E7ERA6 249 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 LTAP01374 205 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 GATA3P23771 443 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 LINC00322Q6ZN03 302 aaPredicted RBP15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 Q6ZS46 218 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 FAM231DQ6ZW35 169 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms