RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 TMEM56-RWDD3S4R434 201 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 MYCBP2O75592 4640 aa10.17□□□□□ -0.78
PNKP-218ENST00000625299 TRAV8-2A0A0B4J237 113 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 A0A1W2PPQ1 181 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 PRB4P10163 310 aaPredicted RBP10.16□□□□□ -0.78
PNKP-218ENST00000625299 ORM2P19652 201 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 TAS2R60P59551 318 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 SMCO1Q147U7 214 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 ESRGQ1W209 222 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 TMEM144Q7Z5S9 345 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 LYPD1Q8N2G4 141 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 TMEM256Q8N2U0 113 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 OR1B1Q8NGR6 318 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 FRZBQ92765 325 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 VCX3AQ9NNX9 186 aa10.16□□□□□ -0.78
PNKP-218ENST00000625299 IGKV1OR2-108A0A075B7D4 117 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 M6PRP20645 277 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 CCR6P51684 374 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 LINC00315P59091 139 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 MZT2AQ6P582 158 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 OR10J6PQ8NGY7 276 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 OR1S1Q8NH92 325 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 RXFP4Q8TDU9 374 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 UPK3BQ9BT76 320 aa10.15□□□□□ -0.78
PNKP-218ENST00000625299 FLG2Q5D862 2391 aaPredicted RBP10.14□□□□□ -0.79
PNKP-218ENST00000625299 DISC1C4P0D8 188 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 ATP6V1G2O95670 118 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 IAPPP10997 89 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 GATA2P23769 480 aaPredicted RBP10.14□□□□□ -0.79
PNKP-218ENST00000625299 RAB11AP62491 216 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 SURF2Q15527 256 aaPredicted RBP10.14□□□□□ -0.79
PNKP-218ENST00000625299 GGNBP1Q5YKI7 109 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 IL22RA2Q969J5 263 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
PNKP-218ENST00000625299 MRPS16Q9Y3D3 137 aaKnown RBP10.14□□□□□ -0.79
PNKP-218ENST00000625299 ZNF701M0R085 212 aaPredicted RBP10.13□□□□□ -0.79
PNKP-218ENST00000625299 EREGO14944 169 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 CFDP00746 253 aaPredicted RBP10.13□□□□□ -0.79
PNKP-218ENST00000625299 HOXA5P20719 270 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 XGP55808 180 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 ATP5IP56385 69 aaPredicted RBP10.13□□□□□ -0.79
PNKP-218ENST00000625299 THAP8Q8NA92 274 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 BPIFCQ8NFQ6 507 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 OR4D5Q8NGN0 318 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 RNASE8Q8TDE3 154 aaKnown RBP10.13□□□□□ -0.79
PNKP-218ENST00000625299 TMEM263Q8WUH6 116 aaKnown RBP10.13□□□□□ -0.79
PNKP-218ENST00000625299 ZNF503Q96F45 646 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 GPR82Q96P67 336 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 FUNDC2Q9BWH2 189 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 SLC45A2Q9UMX9 530 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 GPR132Q9UNW8 380 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
PNKP-218ENST00000625299 VPS13BQ7Z7G8 4022 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 A0A0B4J2A0 478 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 GAGE12BA1L429 117 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 ADAP1O75689 374 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 GAGE7O76087 117 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 ERVFC1-1P60608 527 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 ZNF493Q6ZR52 646 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 OR8A1Q8NGG7 326 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 C15orf40Q8WUR7 153 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 AP3S1Q92572 193 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 SHPKQ9UHJ6 478 aa10.12□□□□□ -0.79
PNKP-218ENST00000625299 AKR1C4P17516 323 aa10.11□□□□□ -0.79
PNKP-218ENST00000625299 S100A7P31151 101 aa10.11□□□□□ -0.79
PNKP-218ENST00000625299 AKR1C1Q04828 323 aa10.11□□□□□ -0.79
PNKP-218ENST00000625299 TMEM182Q6ZP80 229 aaPredicted RBP10.11□□□□□ -0.79
PNKP-218ENST00000625299 LRRC20Q8TCA0 184 aa10.11□□□□□ -0.79
PNKP-218ENST00000625299 A0A087WXM4 84 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 H7BYZ3 331 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
PNKP-218ENST00000625299 RLN2P04090 185 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 AKAIN1P0CW23 69 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 CDKN1BP46527 198 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 Q6ZRN7 208 aaPredicted RBP10.1□□□□□ -0.79
PNKP-218ENST00000625299 CCDC28AQ8IWP9 274 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 OR51S1Q8NGJ8 323 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 C18orf15Q96N68 181 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 PRRT1Q99946 306 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 MDFICQ9P1T7 246 aa10.1□□□□□ -0.79
PNKP-218ENST00000625299 H3BRN7 92 aa10.09□□□□□ -0.79
PNKP-218ENST00000625299 IFNA5P01569 189 aa10.09□□□□□ -0.79
PNKP-218ENST00000625299 CXCL3P19876 107 aa10.09□□□□□ -0.79
PNKP-218ENST00000625299 CDPF1Q6NVV7 123 aa10.09□□□□□ -0.79
PNKP-218ENST00000625299 CLVS1Q8IUQ0 354 aaPredicted RBP10.09□□□□□ -0.79
PNKP-218ENST00000625299 PARD6GQ9BYG4 376 aaPredicted RBP10.09□□□□□ -0.79
PNKP-218ENST00000625299 TMPRSS5Q9H3S3 457 aa10.09□□□□□ -0.79
PNKP-218ENST00000625299 SNURFLB1AK76 121 aa10.08□□□□□ -0.8
PNKP-218ENST00000625299 ANXA3P12429 323 aa10.08□□□□□ -0.8
PNKP-218ENST00000625299 RPL7P18124 248 aaKnown RBP10.08□□□□□ -0.8
PNKP-218ENST00000625299 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
PNKP-218ENST00000625299 RAP2BP61225 183 aa10.08□□□□□ -0.8
PNKP-218ENST00000625299 SSBP1Q04837 148 aaKnown RBP10.08□□□□□ -0.8
PNKP-218ENST00000625299 KIR3DS1Q14943 382 aa10.08□□□□□ -0.8
PNKP-218ENST00000625299 PSG3Q16557 428 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms