RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ALDH3B2P48448 385 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 OR2B8PP59922 312 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 DEFB1P60022 68 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 SNRPGP62308 76 aaKnown RBP1.98□□□□□ -2.09
CDKL5-208ENST00000624953 WT1-ASQ06250 92 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 LAGE3Q14657 143 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 ATP6AP1Q15904 470 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 Q499Y3 187 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 C1orf100Q5SVJ3 147 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 RPL22L1Q6P5R6 122 aaKnown RBP1.98□□□□□ -2.09
CDKL5-208ENST00000624953 PLET1Q6UQ28 207 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 ZNF705AQ6ZN79 300 aaPredicted RBP1.98□□□□□ -2.09
CDKL5-208ENST00000624953 UBE2DNLQ8IWF7 75 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 JAGN1Q8N5M9 183 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 MS4A15Q8N5U1 240 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 TMEM167AQ8TBQ9 72 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 DCANP1Q8TF63 244 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 MAFIPQ8WZ33 124 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 EEF1AKMT3Q96AZ1 226 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 SMIM19Q96E16 107 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 CPNE2Q96FN4 548 aaPredicted RBP1.98□□□□□ -2.09
CDKL5-208ENST00000624953 DERL3Q96Q80 235 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 SPIN2AQ99865 258 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 SPIN2BQ9BPZ2 258 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 RHPN1-AS1Q9BWJ2 59 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 OR51E2Q9H255 320 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 MS4A6AQ9H2W1 248 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 Q9H521 79 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 VSIRQ9H7M9 311 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 PAK1IP1Q9NWT1 392 aaPredicted RBP1.98□□□□□ -2.09
CDKL5-208ENST00000624953 CLEC2DQ9UHP7 191 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 POMPQ9Y244 141 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 UFC1Q9Y3C8 167 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 LPAP08519 4548 aa1.98□□□□□ -2.09
CDKL5-208ENST00000624953 IGHV3-66A0A0C4DH42 116 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 PNMA8CA0A1B0GUJ8 204 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 TRDCB7Z8K6 153 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 G3V2T6 193 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 SMLR1H3BR10 107 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 NDUFA4O00483 81 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 EI24O14681 340 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 BET1O15155 118 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 NUPL2O15504 423 aaKnown RBP1.97□□□□□ -2.09
CDKL5-208ENST00000624953 MRPS14O60783 128 aaKnown RBP1.97□□□□□ -2.09
CDKL5-208ENST00000624953 ATP5LO75964 103 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 IFNA21P01568 189 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 IFNA17P01571 189 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 IGHV3-48P01763 117 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 PRM2P04554 102 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 CD2P06729 351 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 ZNF688P0C7X2 276 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 CELP19835 753 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 HSPA13P48723 471 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 RPL8P62917 257 aaKnown RBP1.97□□□□□ -2.09
CDKL5-208ENST00000624953 PPP3R1P63098 170 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 ARFRP1Q13795 201 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 RTL8BQ17RB0 113 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 VMA21Q3ZAQ7 101 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 YIF1BQ5BJH7 314 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 GDF5OSQ5U4N7 250 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 FAM222AQ5U5X8 452 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 Q6ZVH6 145 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 MOB1BQ7L9L4 216 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 TCF24Q7RTU0 167 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 H1FOOQ8IZA3 346 aaPredicted RBP1.97□□□□□ -2.09
CDKL5-208ENST00000624953 ZNF709Q8N972 641 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 FRZBQ92765 325 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 PHYHIPLQ96FC7 376 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 ARHGAP5-AS1Q96IT6 56 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 OR2A7Q96R45 310 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 S100A13Q99584 98 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 SLC29A1Q99808 456 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 NIPSNAP3BQ9BS92 247 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 THTPAQ9BU02 230 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 TMEM59Q9BXS4 323 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 PECRQ9BY49 303 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 NAA50Q9GZZ1 169 aaKnown RBP1.97□□□□□ -2.09
CDKL5-208ENST00000624953 FGF20Q9NP95 211 aaPredicted RBP1.97□□□□□ -2.09
CDKL5-208ENST00000624953 TMEM14BQ9NUH8 114 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 ABRACLQ9P1F3 81 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 LRRC42Q9Y546 428 aa1.97□□□□□ -2.09
CDKL5-208ENST00000624953 PLAC8L1A1L4L8 177 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 I3L2K1 104 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 J3QRK9 145 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 MFNGO00587 321 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 FABP7O15540 132 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 SCGNO76038 276 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 APOA1P02647 267 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 MT1HL1P0DM35 61 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 HTN3P15516 51 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 HIST1H1BP16401 226 aaKnown RBP1.96□□□□□ -2.1
CDKL5-208ENST00000624953 HLA-GP17693 338 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 RPL13AP40429 203 aaKnown RBP1.96□□□□□ -2.1
CDKL5-208ENST00000624953 MAP2K4P45985 399 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 PSMD7P51665 324 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 EMP1P54849 157 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 FXYD7P58549 80 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 FLOT2Q14254 428 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 PRR4Q16378 134 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 CCDC58Q4VC31 144 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms