RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NEU4Q8WWR8 484 aaPredicted RBP7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 IGFBPL1Q8WX77 278 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 RNF125Q96EQ8 232 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 TIMD4Q96H15 378 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 ZNF414Q96IQ9 312 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 PSG8Q9UQ74 426 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 MRPS16Q9Y3D3 137 aaKnown RBP7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 LOC105371242A0A075B767 164 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 TRAV8-1A0A0A6YYK1 113 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 SERTM2A0A1B0GWG4 89 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 K7EQM0 130 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 CHEK1O14757 476 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 CRXO43186 299 aaPredicted RBP7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 DLEU1O43261 78 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 HNRNPA3P51991 378 aaKnown RBP7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 MFAP4P55083 255 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 RIGQ13278 110 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 PDE6HQ13956 83 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 EBI3Q14213 229 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 PSG3Q16557 428 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 LCN12Q6JVE5 192 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 COX8CQ7Z4L0 72 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 TTC9CQ8N5M4 171 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 Q8N6K4 173 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 KIR3DL3Q8N743 410 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 ZC2HC1AQ96GY0 325 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 TMEM70Q9BUB7 260 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 LPAR2Q9HBW0 351 aa7.57□□□□□ -1.2
IGHV3-54-201ENST00000622166 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 A0A1B0GUT8 65 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 FBLL1A6NHQ2 334 aaKnown RBP7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 SH2D7A6NKC9 451 aaPredicted RBP7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 CCL21O00585 134 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 LINC00614P0C842 121 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 G0S2P27469 103 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 GRNP28799 593 aaKnown RBP7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 ARF6P62330 175 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 ADORA2A-AS1P86434 159 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 Q6AWC8 147 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 ZNF562Q6V9R5 426 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 Q6ZN92 141 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 C17orf77Q96MU5 243 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 TXN2Q99757 166 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 TMEM208Q9BTX3 173 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 LAMTOR2Q9Y2Q5 125 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 FRYQ5TBA9 3013 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 DMDP11532 3685 aa7.56□□□□□ -1.2
IGHV3-54-201ENST00000622166 IGHV1-24A0A0C4DH33 117 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 IL4P05112 153 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 FCGR2BP31994 310 aaPredicted RBP7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 CRIP1P50238 77 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 KLRD1Q13241 179 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 KLK9Q2XQG4 91 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 MINOS1Q5TGZ0 78 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 CCDC144NLQ6NUI1 221 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 Q71RC1 249 aaPredicted RBP7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 SPATA12Q7Z6I5 190 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 ARPC1AQ92747 370 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 CLEC5AQ9NY25 188 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 KLK9Q9UKQ9 250 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 MINOS1-NBL1R4GNA1 71 aa7.55□□□□□ -1.2
IGHV3-54-201ENST00000622166 SYS1-DBNDD2H3BUS1 97 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 GNG7O60262 68 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 IGLL1P15814 213 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 TSPOP30536 169 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 UCNP55089 124 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 PSG9Q00887 426 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 KLRB1Q12918 225 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 Q56UQ5 140 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 ZNF493Q6ZR52 646 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 DTX2Q86UW9 622 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 ST20Q9HBF5 79 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 MSRB2Q9Y3D2 182 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 HILPDAQ9Y5L2 63 aa7.54□□□□□ -1.2
IGHV3-54-201ENST00000622166 WDFY4Q6ZS81 3184 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 DSPP15924 2871 aaKnown RBP7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 NDUFB8O95169 186 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 LEPROTL1O95214 131 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 ARMS2P0C7Q2 107 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 FOSL1P15407 271 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 CD24P25063 80 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 SRSF2Q01130 221 aaKnown RBP7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 BATFQ16520 125 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 MAJINQ3KP22 176 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 KLF17Q5JT82 389 aaPredicted RBP7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 VMO1Q7Z5L0 202 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 STPG4Q8N801 248 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 TMEM191AQ9H0A3 160 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 AAMDCQ9H7C9 122 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 C21orf62Q9NYP8 219 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 THYN1Q9P016 225 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 GOLT1BQ9Y3E0 138 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 U3KQK5 164 aa7.53□□□□□ -1.2
IGHV3-54-201ENST00000622166 PKDREJQ9NTG1 2253 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms