RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ALKBH7Q9BT30 221 aaPredicted RBP7.43□□□□□ -1.22
PDPN-212ENST00000621990 NRN1Q9NPD7 142 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 MINOS1-NBL1R4GNA1 71 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 TRAV30A0A087WSZ9 112 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 A6NNC1 897 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 ZNF705FA8MVS1 300 aaPredicted RBP7.43□□□□□ -1.22
PDPN-212ENST00000621990 F8W735 103 aaPredicted RBP7.43□□□□□ -1.22
PDPN-212ENST00000621990 H3BTX0 84 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 P01737 135 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 ZNF705DP0CH99 300 aaPredicted RBP7.43□□□□□ -1.22
PDPN-212ENST00000621990 ZNF705BP0CI00 300 aaPredicted RBP7.43□□□□□ -1.22
PDPN-212ENST00000621990 NHLH1Q02575 133 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 SIGLEC15Q6ZMC9 328 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 BPIFA4PQ86YQ2 179 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 TMEM75Q8N9X5 138 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 IGFBPL1Q8WX77 278 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 RPH3ALQ9UNE2 315 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 ARHGAP32A7KAX9 2087 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 OVOL3O00110 214 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 AMTP48728 403 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 HBBP68871 147 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 TDRG1Q3Y452 100 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 VMO1Q7Z5L0 202 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 NIT1Q86X76 327 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 DYNAPQ8N1N2 210 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 EXOC3-AS1Q8N2X6 119 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 OR4B1Q8NGF8 309 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 ARPC1AQ92747 370 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 ZNF785A8K8V0 405 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
PDPN-212ENST00000621990 RBPMS2Q6ZRY4 209 aaKnown RBP7.42□□□□□ -1.22
PDPN-212ENST00000621990 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
PDPN-212ENST00000621990 FAM103A1Q9BTL3 118 aaKnown RBP7.42□□□□□ -1.22
PDPN-212ENST00000621990 SIRPDQ9H106 197 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 ABCA1O95477 2261 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 CSMD1Q96PZ7 3565 aa7.42□□□□□ -1.22
PDPN-212ENST00000621990 ATRXP46100 2492 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 A0A1W2PPR1 153 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 CD24P25063 80 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 ZFP36P26651 326 aaKnown RBP7.41□□□□□ -1.22
PDPN-212ENST00000621990 NDPQ00604 133 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 PDE6HQ13956 83 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 TCF24Q7RTU0 167 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 OR4F17Q8NGA8 305 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 VN1R17PQ8TDU5 208 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
PDPN-212ENST00000621990 ITPR1Q14643 2758 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 A0A1B0GV90 55 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 HLA-DRB1P01911 266 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 APOHP02749 345 aaPredicted RBP7.41□□□□□ -1.22
PDPN-212ENST00000621990 IL4P05112 153 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 RAB4AP20338 218 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 KLK9Q2XQG4 91 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 GOLT1AQ6ZVE7 132 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 S100A7AQ86SG5 101 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 ZNF414Q96IQ9 312 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 KLK9Q9UKQ9 250 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 ZFP30Q9Y2G7 519 aa7.41□□□□□ -1.22
PDPN-212ENST00000621990 PMCHP20382 165 aa7.4□□□□□ -1.22
PDPN-212ENST00000621990 FCGR2BP31994 310 aaPredicted RBP7.4□□□□□ -1.22
PDPN-212ENST00000621990 MFAP4P55083 255 aa7.4□□□□□ -1.22
PDPN-212ENST00000621990 HES1Q14469 280 aa7.4□□□□□ -1.22
PDPN-212ENST00000621990 KLF17Q5JT82 389 aaPredicted RBP7.4□□□□□ -1.22
PDPN-212ENST00000621990 C17orf77Q96MU5 243 aa7.4□□□□□ -1.22
PDPN-212ENST00000621990 MIEN1Q9BRT3 115 aa7.4□□□□□ -1.22
PDPN-212ENST00000621990 VAMP8Q9BV40 100 aa7.4□□□□□ -1.22
PDPN-212ENST00000621990 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.22
PDPN-212ENST00000621990 DIRC3C9JPN6 131 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 EREGO14944 169 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 GNG7O60262 68 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 EGR2P11161 476 aaPredicted RBP7.4□□□□□ -1.23
PDPN-212ENST00000621990 CTRLP40313 264 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 CAMPP49913 170 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 KRTDAPP60985 99 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 CIARTQ8N365 385 aaPredicted RBP7.4□□□□□ -1.23
PDPN-212ENST00000621990 DAZAP1Q96EP5 407 aaKnown RBP7.4□□□□□ -1.23
PDPN-212ENST00000621990 AJUBAQ96IF1 538 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 SNHG12Q9BXW3 62 aa7.4□□□□□ -1.23
PDPN-212ENST00000621990 HAX1O00165 279 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 C3orf79P0CE67 100 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 PSG3Q16557 428 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 PRNTQ86SH4 94 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 C21orf62Q9NYP8 219 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 COL8A1P27658 744 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 Q71RC1 249 aaPredicted RBP7.39□□□□□ -1.23
PDPN-212ENST00000621990 OR2D3Q8NGH3 330 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 ZC2HC1AQ96GY0 325 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 PGLYRP4Q96LB8 373 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 THYN1Q9P016 225 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 SVEP1Q4LDE5 3571 aa7.39□□□□□ -1.23
PDPN-212ENST00000621990 IGHV7-81A0A0B4J1V7 117 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 IGHV2-70DA0A0C4DH43 119 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 SERTM2A0A1B0GWG4 89 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 K7EQM0 130 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 DMRTA1Q5VZB9 504 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 COX8CQ7Z4L0 72 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 URB1-AS1Q96HZ7 61 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms