RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 A0A1W2PPM0 123 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 C6orf226Q5I0X4 101 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 C1QTNF5Q9BXJ0 243 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 CNOT1A5YKK6 2376 aaKnown RBP5.94□□□□□ -1.46
COLCA1-205ENST00000620864 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.94□□□□□ -1.46
COLCA1-205ENST00000620864 YLPM1P49750 1951 aaKnown RBP5.94□□□□□ -1.46
COLCA1-205ENST00000620864 DOCK10Q96BY6 2186 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 IGHG3P01860 377 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 EGR2P11161 476 aaPredicted RBP5.94□□□□□ -1.46
COLCA1-205ENST00000620864 DSCR9P59020 149 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 CDCP2Q5VXM1 449 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 PLXNA1Q9UIW2 1896 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 DOCK5Q9H7D0 1870 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 A0A0G2JK05 382 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 C17orf98A8MV24 154 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 INS-IGF2F8WCM5 200 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 RAMP3O60896 148 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 INSP01308 110 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 SYNJ2BPP57105 145 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 Q6ZT83 130 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 RETNQ9HD89 108 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 CD59P13987 128 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 APOBEC3AP31941 199 aaPredicted RBP5.94□□□□□ -1.46
COLCA1-205ENST00000620864 RPL39P5Q59GN2 51 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 ZC2HC1BQ5TFG8 222 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 C9orf139Q6ZV77 190 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 BHLHA9Q7RTU4 235 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 AMN1Q8IY45 258 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 NCR2O95944 276 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 AMELYQ99218 206 aa5.94□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV3OR16-13A0A075B7E8 117 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV3-74A0A0B4J1X5 117 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 FOXS1O43638 330 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 GNG5P63218 68 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 LY6G6FQ5SQ64 297 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 SIGLEC15Q6ZMC9 328 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 PRIMA1Q86XR5 153 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF236Q9UL36 1845 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 A0A087WX48 190 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF138P52744 262 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 K7EMI3 77 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 CELA3AP09093 270 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 COX8AP10176 69 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 ZNRF1Q8ND25 227 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 NUP35Q8NFH5 326 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 PRO1854Q9UHT4 67 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 hDV102S1A0JD36 115 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 CDKN1AP38936 164 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 GFI1BQ5VTD9 330 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF826PQ6ZT77 177 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 NABP1Q96AH0 204 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 MRPS18CQ9Y3D5 142 aaKnown RBP5.93□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF497Q6ZNH5 498 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF501Q96CX3 271 aaPredicted RBP5.93□□□□□ -1.46
COLCA1-205ENST00000620864 DOCK8Q8NF50 2099 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 PI4KAP42356 2102 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV3-49A0A0A0MS15 119 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF492Q9P255 531 aa5.93□□□□□ -1.46
COLCA1-205ENST00000620864 IGKV3D-20A0A0C4DH25 116 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 RHODO00212 210 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 IGKV1D-33P01593 117 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 IGKV1-33P01594 117 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 NRXN2Q9P2S2 1712 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 OOSP1A8MZH6 123 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 HRKO00198 91 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV2-70P01814 119 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 BTCP35070 178 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 NBL1P41271 181 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 LGALS9BQ3B8N2 356 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 LGALS9CQ6DKI2 356 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 TRPT1Q86TN4 253 aaKnown RBP5.92□□□□□ -1.46
COLCA1-205ENST00000620864 NRTNQ99748 197 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 REG4Q9BYZ8 158 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 DOCK7Q96N67 2140 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 PRSS22Q9GZN4 317 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 TRAV41A0A0B4J266 112 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV3-66A0A0C4DH42 116 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 CSTL1Q9H114 145 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 FOXG1P55316 489 aaPredicted RBP5.92□□□□□ -1.46
COLCA1-205ENST00000620864 IGLV3-21P80748 117 aaPredicted RBP5.92□□□□□ -1.46
COLCA1-205ENST00000620864 SRSF3P84103 164 aaKnown RBP5.92□□□□□ -1.46
COLCA1-205ENST00000620864 RFNGQ9Y644 331 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 CLEC19AQ6UXS0 136 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 SIGLEC12Q96PQ1 595 aa5.92□□□□□ -1.46
COLCA1-205ENST00000620864 CTHRC1Q96CG8 243 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 C22orf46C9J442 243 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 TCRAP04437 139 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 MRPL14Q6P1L8 145 aaKnown RBP5.91□□□□□ -1.46
COLCA1-205ENST00000620864 H0YIZ8 118 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 SAP30O75446 220 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV3-23P01764 117 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.91□□□□□ -1.46
COLCA1-205ENST00000620864 DOCK3Q8IZD9 2030 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 CRYBA4P53673 196 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 SPXQ9BT56 116 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 POLR3KQ9Y2Y1 108 aaPredicted RBP5.91□□□□□ -1.46
COLCA1-205ENST00000620864 TRBV7-1A0A0A6YYK4 115 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV2-26A0A0B4J1V2 119 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 ZNF876PQ49A33 203 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 CEND1Q8N111 149 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms