RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 FAM74A4Q5TZK3 123 aa2.53□□□□□ -2
LPP-221ENST00000618621 TMEM200BQ69YZ2 307 aa2.53□□□□□ -2
LPP-221ENST00000618621 BOD1L2Q8IYS8 172 aa2.53□□□□□ -2
LPP-221ENST00000618621 FGFBP3Q8TAT2 258 aa2.53□□□□□ -2
LPP-221ENST00000618621 CLEC7AQ9BXN2 247 aa2.53□□□□□ -2
LPP-221ENST00000618621 RBBP6Q7Z6E9 1792 aaKnown RBP2.53□□□□□ -2
LPP-221ENST00000618621 MAST4O15021 2626 aa2.53□□□□□ -2
LPP-221ENST00000618621 PLA2G1BP04054 148 aaKnown RBP2.53□□□□□ -2
LPP-221ENST00000618621 NTF4P34130 210 aa2.53□□□□□ -2
LPP-221ENST00000618621 ZNF474Q6S9Z5 364 aaPredicted RBP2.53□□□□□ -2
LPP-221ENST00000618621 WISP1O95388 367 aa2.53□□□□□ -2
LPP-221ENST00000618621 LYPD1Q8N2G4 141 aa2.53□□□□□ -2
LPP-221ENST00000618621 RPP25LQ8N5L8 163 aaKnown RBP2.53□□□□□ -2
LPP-221ENST00000618621 RNF152Q8N8N0 203 aa2.53□□□□□ -2
LPP-221ENST00000618621 SNHG12Q9BXW3 62 aa2.53□□□□□ -2
LPP-221ENST00000618621 ERG28Q9UKR5 140 aa2.53□□□□□ -2
LPP-221ENST00000618621 A0A1B0GUS0 222 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 LILRA1O75019 489 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 GUSBP1Q15486 140 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 Q6ZWC4 215 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 ST6GALNAC3Q8NDV1 305 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 LINC00312Q9Y6C7 94 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 LAMB2P55268 1798 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 CENPVL3A0A0U1RRI6 287 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 C15orf61A6NNL5 157 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 MMP23AO75900 390 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 UCNP55089 124 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 CDPF1Q6NVV7 123 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 NUP35Q8NFH5 326 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 LAMTOR3Q9UHA4 124 aa2.53□□□□□ -2.01
LPP-221ENST00000618621 ATP5G3P48201 142 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 LAGE3Q14657 143 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 MRPL53Q96EL3 112 aaKnown RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 SSBP4Q9BWG4 385 aaPredicted RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 FAM27E3Q08E93 113 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 C9orf106Q8NAJ2 232 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 MRPL27Q9P0M9 148 aaKnown RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 IGKCP01834 107 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 HSD52Q0P140 79 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 BCL6BQ8N143 479 aaPredicted RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 ARPC1AQ92747 370 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 LINC01560Q8TB33 94 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 PRCDQ00LT1 54 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 OR9G4Q8NGQ1 327 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 FAM57AQ8TBR7 257 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 SSBP3Q9BWW4 388 aaPredicted RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 GGTLC1Q9BX51 225 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 H3BMM0 161 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 CELA3BP08861 270 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 DTX1Q86Y01 620 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 LEAP2Q969E1 77 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 UBE2WQ96B02 151 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 TRAV8-2A0A0B4J237 113 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 IL18BPO95998 194 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 PDLIM4P50479 330 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 C17orf82Q86X59 251 aaPredicted RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 MGST2Q99735 147 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 SCRT1Q9BWW7 348 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 FBXL7Q9UJT9 491 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 IGHV1-69-2A0A0G2JMI3 117 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 C9JCJ5 164 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 ADMP35318 185 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 RPRMLQ8N4K4 120 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 NABP1Q96AH0 204 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 LINC01587Q99440 93 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 TCRBV4S1A1TA0A5B7 111 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 C9orf172C9J069 976 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 IGKV1-5P01602 117 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 FAM110AQ9BQ89 295 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 RBMY1BA6NDE4 496 aaKnown RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 RBMY1EA6NEQ0 496 aaKnown RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 NDUFC2-KCTD14E9PQ53 114 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 IGHV3-48P01763 117 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 RBMY1DP0C7P1 496 aaKnown RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 RBMY1A1P0DJD3 496 aaKnown RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 RBMY1CP0DJD4 496 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 GAGE13Q4V321 117 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 VGLL1Q99990 258 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 ZMAT4Q9H898 229 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 FRMPD3Q5JV73 1810 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 TDGF1P3P51864 188 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 FOXA3P55318 350 aaPredicted RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 CMC4P56277 68 aaPredicted RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 HIGD2BQ4VC39 106 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 USMG5Q96IX5 58 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 GFRA4Q9GZZ7 299 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 ATRQ13535 2644 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 TOMM40O96008 361 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 RSPO1Q2MKA7 263 aaPredicted RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 PSG8Q9UQ74 426 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 UBE2BP63146 152 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 PVRIGQ6DKI7 326 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 VSIRQ9H7M9 311 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 FLNBO75369 2602 aaKnown RBP2.52□□□□□ -2.01
LPP-221ENST00000618621 C17orf100A8MU93 164 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 PLNP26678 52 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 FOXL2NBQ6ZUU3 175 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 LYPD6Q86Y78 171 aa2.52□□□□□ -2.01
LPP-221ENST00000618621 KIR3DL3Q8N743 410 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms