RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZNF107Q9UII5 783 aaPredicted RBP6.64□□□□□ -1.35
GPC6-202ENST00000617456 H3BQ15 152 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 SLC17A2O00624 439 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 FRMD6-AS1P0C7T7 363 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 HIST1H1EP10412 219 aaKnown RBP6.63□□□□□ -1.35
GPC6-202ENST00000617456 VDAC1P21796 283 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 PSMB8P28062 276 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 REG1BP48304 166 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 CRIP2P52943 208 aaPredicted RBP6.63□□□□□ -1.35
GPC6-202ENST00000617456 SEC61GP60059 68 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 MRPL54Q6P161 138 aaKnown RBP6.63□□□□□ -1.35
GPC6-202ENST00000617456 C19orf35Q6ZS72 473 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 CEACAM19Q7Z692 300 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 ODF3L1Q8IXM7 274 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 INO80EQ8NBZ0 244 aaPredicted RBP6.63□□□□□ -1.35
GPC6-202ENST00000617456 OR5A1Q8NGJ0 315 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 OR52I2Q8NH67 350 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 OR1L1Q8NH94 360 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 UBE2E2Q96LR5 201 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 GTSF1LQ9H1H1 148 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 COMMD9Q9P000 198 aa6.63□□□□□ -1.35
GPC6-202ENST00000617456 IGHV3-43A0A0B4J1X8 118 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 IGHV3-72A0A0B4J1Y9 119 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 NDUFA3O95167 84 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 ORM1P02763 201 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 REG1AP05451 166 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 IGHV3-43DP0DP04 118 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 BLVRBP30043 206 aaPredicted RBP6.62□□□□□ -1.35
GPC6-202ENST00000617456 PPIFP30405 207 aaKnown RBP6.62□□□□□ -1.35
GPC6-202ENST00000617456 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
GPC6-202ENST00000617456 TMEM267Q0VDI3 215 aaPredicted RBP6.62□□□□□ -1.35
GPC6-202ENST00000617456 PNRC1Q12796 327 aaPredicted RBP6.62□□□□□ -1.35
GPC6-202ENST00000617456 UNC119Q13432 240 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 FHL3Q13643 280 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 FAM162BQ5T6X4 162 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 FAM27D1Q5T7N8 215 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 RNASEKQ6P5S7 137 aaKnown RBP6.62□□□□□ -1.35
GPC6-202ENST00000617456 C4orf3Q8WVX3 66 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 BTF3L4Q96K17 158 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 NABP2Q9BQ15 211 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 AGMATQ9BSE5 352 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 NDFIP1Q9BT67 221 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 C20orf24Q9BUV8 137 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 KIAA1456Q9P272 454 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 STARD9Q9P2P6 4700 aa6.62□□□□□ -1.35
GPC6-202ENST00000617456 TRAV1-2A0A0B4J238 106 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 FOXI3A8MTJ6 420 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 ZNF705FA8MVS1 300 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 ZNF736B4DX44 427 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 NBR2O15453 112 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 RS1O15537 224 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 HYPMO75409 117 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 NUDT3O95989 172 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 ZNF705DP0CH99 300 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 ZNF705BP0CI00 300 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 TSPOP30536 169 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 MEF2BQ02080 365 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 C6orf201Q7Z4U5 140 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.61□□□□□ -1.35
GPC6-202ENST00000617456 OR10V1Q8NGI7 309 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 OR5AN1Q8NGI8 311 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 DCUN1D4Q92564 292 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 IL22RA2Q969J5 263 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 LPAR5Q9H1C0 372 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 IFI27L2Q9H2X8 130 aa6.61□□□□□ -1.35
GPC6-202ENST00000617456 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 SAA2-SAA4A0A096LPE2 208 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 EIF4EP06730 217 aaKnown RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 SAA2P0DJI9 122 aaPredicted RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 FAUP35544 74 aaKnown RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 PPP1CCP36873 323 aaKnown RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 LPAR6P43657 344 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 TAS2R20P59543 309 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 RPL8P62917 257 aaKnown RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 SOHLH1Q5JUK2 328 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 FAM53AQ6NSI3 398 aaPredicted RBP6.6□□□□□ -1.35
GPC6-202ENST00000617456 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 RNF183Q96D59 192 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 TVP23CQ96ET8 276 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 HSPB9Q9BQS6 159 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 DERL1Q9BUN8 251 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 VSIG4Q9Y279 399 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 V9GY05 133 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
GPC6-202ENST00000617456 IGHV7-81A0A0B4J1V7 117 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 TRAV41A0A0B4J266 112 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 TMEM272A0A1B0GTI8 110 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 C13orf42A0A1B0GVH6 325 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 A0A1W2PRE2 83 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 RRHO14718 337 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 ZNF207O43670 478 aaKnown RBP6.59□□□□□ -1.35
GPC6-202ENST00000617456 CT45A6P0DMU7 189 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 CT45A5P0DMU8 189 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 CT45A7P0DMV0 189 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 GP9P14770 177 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms