RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 RAB9BQ9NP90 201 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 CHTOPQ9Y3Y2 248 aaKnown RBP5.37□□□□□ -1.55
LMO3-235ENST00000616247 SPTA1P02549 2419 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 A0A1B0GV72 72 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 TMEM213A2RRL7 107 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 J3QW42 95 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 WT1-ASQ06250 92 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 MZT1Q08AG7 82 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 ZCCHC24Q8N2G6 241 aaKnown RBP5.37□□□□□ -1.55
LMO3-235ENST00000616247 STXBP6Q8NFX7 210 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 DDB2Q92466 427 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 DKK2Q9UBU2 259 aa5.37□□□□□ -1.55
LMO3-235ENST00000616247 SRRM5B3KS81 715 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 CRXO43186 299 aaPredicted RBP5.36□□□□□ -1.55
LMO3-235ENST00000616247 CCL8P80075 99 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 WFDC2Q14508 124 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 C17orf58Q2M2W7 97 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 OR5AN1Q8NGI8 311 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 CACNG8Q8WXS5 425 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 IFI27L1Q96BM0 104 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 SH3BGRL2Q9UJC5 107 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 M0R3E3 92 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 WISP2O76076 250 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 TNFRSF1AP19438 455 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 PPIFP30405 207 aaKnown RBP5.36□□□□□ -1.55
LMO3-235ENST00000616247 LGALS7P47929 136 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 DIAPH2-AS1Q14236 149 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 GTSCR1Q86UQ5 136 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 FAM90A1Q86YD7 464 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 OR5A1Q8NGJ0 315 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 TNFRSF14Q92956 283 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 NDFIP1Q9BT67 221 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 F2RL2O00254 374 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 CCL11P51671 97 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 FXYD2P54710 66 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 TNFAIP6P98066 277 aaPredicted RBP5.36□□□□□ -1.55
LMO3-235ENST00000616247 SCGB2A2Q13296 93 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 TWIST1Q15672 202 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 MBNL2Q5VZF2 373 aaKnown RBP5.36□□□□□ -1.55
LMO3-235ENST00000616247 FAM169BQ8N8A8 192 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 FMC1Q96HJ9 113 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 TPSG1Q9NRR2 321 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 TMEM160Q9NX00 188 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 HIGD1AQ9Y241 93 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 ABCA4P78363 2273 aa5.36□□□□□ -1.55
LMO3-235ENST00000616247 FNDC10F2Z333 226 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 H3BMG7 143 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 K7EQM0 130 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 NKX2-8O15522 239 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 EVI2AP22794 236 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 DLX1P56177 255 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 CKS1BP61024 79 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 ARPC1AQ92747 370 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 C17orf77Q96MU5 243 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 ZNF714Q96N38 554 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 SIGLEC8Q9NYZ4 499 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 RPUSD1Q9UJJ7 312 aaKnown RBP5.35□□□□□ -1.55
LMO3-235ENST00000616247 SOX21Q9Y651 276 aaPredicted RBP5.35□□□□□ -1.55
LMO3-235ENST00000616247 GAGE12HA6NDE8 117 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.35□□□□□ -1.55
LMO3-235ENST00000616247 LTAP01374 205 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 RAB9AP51151 201 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 UFSP1Q6NVU6 142 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 Q6ZT83 130 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 OR4X2Q8NGF9 303 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 DCHS1Q96JQ0 3298 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 SPAARA0A1B0GVQ0 90 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 A0A1B0GWB2 263 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 K7ESF4 209 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 CEACAM3P40198 252 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 ATP5G2Q06055 141 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 VMA21Q3ZAQ7 101 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 LYZL1Q6UWQ5 148 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 Q86TA4 180 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 RPRMLQ8N4K4 120 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 RNF7Q9UBF6 113 aa5.35□□□□□ -1.55
LMO3-235ENST00000616247 IGHV3OR16-8A0A075B7F1 116 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 TMEM189A5PLL7 270 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 CNIH1O95406 144 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 HBDP02042 147 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 BMI1P35226 326 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 RUSC1-AS1Q66K80 236 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 ORMDL3Q8N138 153 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 OR9G4Q8NGQ1 327 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 FOXC2Q99958 501 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 NDUFA4L2Q9NRX3 87 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 INSIG2Q9Y5U4 225 aa5.34□□□□□ -1.55
LMO3-235ENST00000616247 IGHV1-18A0A0C4DH31 117 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 PSMB11A5LHX3 300 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 C22orf46C9J442 243 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 TGFAP01135 160 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 ORM1P02763 201 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 MSMPQ1L6U9 139 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 CCL17Q92583 94 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 HIST1H4GQ99525 98 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 RASL11BQ9BPW5 248 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 MALRD1Q5VYJ5 2156 aa5.34□□□□□ -1.56
LMO3-235ENST00000616247 IGHV3-35A0A0C4DH35 117 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 A0A1W2PPI3 338 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms