RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 C5orf64Q2M2E5 130 aa10.4□□□□□ -0.74
TCF4-248ENST00000616053 IMMP2LQ96T52 175 aa10.4□□□□□ -0.74
TCF4-248ENST00000616053 ATP6V0BQ99437 205 aa10.4□□□□□ -0.74
TCF4-248ENST00000616053 PMS2P5A8MQ11 134 aa10.4□□□□□ -0.74
TCF4-248ENST00000616053 Q96M66 194 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 NUP188Q5SRE5 1749 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 CREBBPQ92793 2442 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 A0A1B0GTL3 188 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 IL18BPO95998 194 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 MP68P56378 58 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 ZNF124Q15973 351 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 TNCP24821 2201 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 XCL1P47992 114 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 MRPL52Q86TS9 123 aaKnown RBP10.39□□□□□ -0.75
TCF4-248ENST00000616053 NABP1Q96AH0 204 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 IGKV4-1P06312 121 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 PYYP10082 97 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 CAMK2N2Q96S95 79 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 NEUROG3Q9Y4Z2 214 aa10.39□□□□□ -0.75
TCF4-248ENST00000616053 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 CHCHD1Q96BP2 118 aaKnown RBP10.38□□□□□ -0.75
TCF4-248ENST00000616053 RNASE7Q9H1E1 156 aaKnown RBP10.38□□□□□ -0.75
TCF4-248ENST00000616053 H0Y9J4 135 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 CRYBG1Q9Y4K1 1723 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 A0A1B0GUS0 222 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 IGHV1-46P01743 117 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 PFN1P07737 140 aaKnown RBP10.38□□□□□ -0.75
TCF4-248ENST00000616053 A6NNC1 897 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 YPEL1O60688 119 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 YPEL2Q96QA6 119 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 KLK9Q9UKQ9 250 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 HCFC1P51610 2035 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 TRAV5A0A0B4J249 113 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 FSTP19883 344 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 TRAF4Q9BUZ4 470 aaPredicted RBP10.38□□□□□ -0.75
TCF4-248ENST00000616053 IGHV1-3A0A0C4DH29 117 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 SCRT1Q9BWW7 348 aa10.38□□□□□ -0.75
TCF4-248ENST00000616053 TIMP3P35625 211 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 IGHV1-18A0A0C4DH31 117 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 RS1O15537 224 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 IGHV3-30P01768 117 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 REG4Q9BYZ8 158 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 ICOSQ9Y6W8 199 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 SPTAN1Q13813 2472 aaKnown RBP10.37□□□□□ -0.75
TCF4-248ENST00000616053 J3QLI3 93 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
TCF4-248ENST00000616053 EPOPA6NHQ4 379 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 A0A0G2JMM0 328 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 A0A1W2PPB8 328 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 A0A1W2PRS3 328 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 KIR3DP1A8MWS1 328 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 FOXF2Q12947 444 aa10.37□□□□□ -0.75
TCF4-248ENST00000616053 MRPL36Q9P0J6 103 aaKnown RBP10.37□□□□□ -0.75
TCF4-248ENST00000616053 SMPXQ9UHP9 88 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 RGPD1P0DJD0 1748 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 SHISA4Q96DD7 197 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 SPART-AS1P0CW21 52 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 IGHV1-8P0DP01 117 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 LINC01551Q86U37 167 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 A0A0G2JK05 382 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 PROP1O75360 226 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 ODF1Q14990 250 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 RCC1LQ96I51 464 aaKnown RBP10.36□□□□□ -0.75
TCF4-248ENST00000616053 MORN2Q502X0 79 aa10.36□□□□□ -0.75
TCF4-248ENST00000616053 LY6HO94772 140 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 ATP5G3P48201 142 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 A0A0G2JNJ9 132 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 NANOS3P60323 173 aaKnown RBP10.35□□□□□ -0.75
TCF4-248ENST00000616053 Q9UFV3 132 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 KIAA1549Q9HCM3 1950 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 CXCL3P19876 107 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 TMEM200BQ69YZ2 307 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 hDV102S1A0JD36 115 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 IGFBPL1Q8WX77 278 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 LYZL4Q96KX0 146 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 RFNGQ9Y644 331 aa10.35□□□□□ -0.75
TCF4-248ENST00000616053 SLC25A48Q6ZT89 311 aaKnown RBP10.34□□□□□ -0.75
TCF4-248ENST00000616053 EXOC3-AS1Q8N2X6 119 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 WFDC6Q9BQY6 131 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 C1QTNF9P0C862 333 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 PUSL1Q8N0Z8 303 aaKnown RBP10.34□□□□□ -0.75
TCF4-248ENST00000616053 SIGLEC5O15389 551 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 RPUSD1Q9UJJ7 312 aaKnown RBP10.34□□□□□ -0.75
TCF4-248ENST00000616053 GP9P14770 177 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 GTSF1LQ9H1H1 148 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 SEM1Q6ZVN7 128 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 DENND4AQ7Z401 1863 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 IGHV1-24A0A0C4DH33 117 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
TCF4-248ENST00000616053 NDUFA4O00483 81 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms