RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NPIPB5A8MRT5 1133 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 NDUFB8O95169 186 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 ELANEP08246 267 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 YPEL3P61236 119 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 FBLN7Q53RD9 439 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 TMEM136Q6ZRR5 245 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 PRELID3AQ96N28 172 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 VPREB3Q9UKI3 123 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 MED13Q9UHV7 2174 aa7.59□□□□□ -1.19
CLTCL1-208ENST00000615606 TRAV1-1A0A0B4J248 108 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 IZUMO1RA6ND01 250 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 G3V318 75 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 ZNF324O75467 553 aaPredicted RBP7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 CBLN1P23435 193 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 ZNF134P52741 427 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 SPATA31B1PQ5VZV4 182 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 IL17RELQ6ZVW7 336 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 OR11H6Q8NGC7 330 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 MIEN1Q9BRT3 115 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 OSTCQ9NRP0 149 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 YLPM1P49750 1951 aaKnown RBP7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 MALRD1Q5VYJ5 2156 aa7.59□□□□□ -1.2
CLTCL1-208ENST00000615606 DOCK10Q96BY6 2186 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 TMEM50AO95807 157 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 DEFB112Q30KQ8 113 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 SLC25A34Q6PIV7 304 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 LINC00477Q96M19 166 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 A6NJY4 79 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 RPL23P62829 140 aaKnown RBP7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 DENND4AQ7Z401 1863 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 SMIM12Q96EX1 92 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 ZNF138P52744 262 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 SEPSECSQ9HD40 501 aaKnown RBP7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 CYTL1Q9NRR1 136 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 LYL1P12980 280 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 DEFB121Q5J5C9 76 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 TMEM183AQ8IXX5 376 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 SHANK2-AS3Q9BTD1 123 aa7.58□□□□□ -1.2
CLTCL1-208ENST00000615606 A0A087WWC5 75 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 A0A1B0GV90 55 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 PCP4P48539 62 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 GUSBP1Q15486 140 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 SPRNQ5BIV9 151 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 FGF23Q9GZV9 251 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 KLK15Q9H2R5 256 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 GEMIN7Q9H840 131 aaKnown RBP7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 MUC21A0A0G2JKD1 596 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 MUC21A0A140T8X8 626 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 LOC105371267A0A1B0GV96 52 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 HIGD1CA8MV81 97 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 H3BUA1 57 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 RPP25LQ8N5L8 163 aaKnown RBP7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 MCRIP2Q9BUT9 160 aaKnown RBP7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 IGKV2-40A0A087WW87 121 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 TRGV4A0A0C4DH28 118 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 IGKV2D-40P01614 121 aaPredicted RBP7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 LCN12Q6JVE5 192 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 RFNGQ9Y644 331 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 CEP192Q8TEP8 1941 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 F2Z2F3 143 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 TCRAP04437 139 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 FABP2P12104 132 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 PLP1P60201 277 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 POU2AF1Q16633 256 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 MLANAQ16655 118 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 ACTL10Q5JWF8 245 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 TMEM70Q9BUB7 260 aa7.57□□□□□ -1.2
CLTCL1-208ENST00000615606 FCN3O75636 299 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 ATRAIDQ6UW56 229 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 ORMDL3Q8N138 153 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 AGMATQ9BSE5 352 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 RNASE7Q9H1E1 156 aaKnown RBP7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 NRN1Q9NPD7 142 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 JKAMPQ9P055 326 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 IGKV3OR2-268A0A0C4DH90 116 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 LOC107984156A0A0G2JMH3 177 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 PDE6HQ13956 83 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 ARL17AQ8IVW1 177 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 LIME1Q9H400 295 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 PRDM13Q9H4Q3 707 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 SELENOKQ9Y6D0 94 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 FOXA3P55318 350 aaPredicted RBP7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 DIAPH2-AS1Q14236 149 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 FAM120AOSQ5T036 256 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 NRGNQ92686 78 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 PCDH15Q96QU1 1955 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 CACNA1AO00555 2505 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 NDUFA4O00483 81 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 INSP01308 110 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 IGHV4-59P01825 116 aa7.56□□□□□ -1.2
CLTCL1-208ENST00000615606 RPL35AP18077 110 aaKnown RBP7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 OR10J3Q5JRS4 329 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 DNLZQ5SXM8 178 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 WFDC12Q8WWY7 111 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 SRRM4A7MD48 611 aaKnown RBP7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 H7C2G1 150 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms