RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, human

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GEN1-208	ENST00000614478		H3BUA1	57 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478		H7BYZ3	331 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	TPPP2	P59282	170 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	USF2	Q15853	346 aa	Predicted RBP	13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	S100A7A	Q86SG5	101 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	SIGLECL1	Q8N7X8	197 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	DERL1	Q9BUN8	251 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	BRI3	O95415	125 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	TMEM95	Q3KNT9	176 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	OR5B12	Q96R08	314 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	SHANK2-AS3	Q9BTD1	123 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	ZNF580	Q9UK33	172 aa		13.74	□□□□□ -0.21
GEN1-208	ENST00000614478	GGTLC3	B5MD39	225 aa		13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	PFN1	P07737	140 aa	Known RBP	13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	SNRPC	P09234	159 aa	Known RBP	13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	S100P	P25815	95 aa		13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	ZNF343	Q6P1L6	599 aa		13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	IMMP2L	Q96T52	175 aa		13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	PYGO2	Q9BRQ0	406 aa		13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	BIN3	Q9NQY0	253 aa		13.73	□□□□□ -0.21
GEN1-208	ENST00000614478	TMEM14C	Q9P0S9	112 aa		13.73	□□□□□ -0.21
GEN1-208	ENST00000614478		H3BRN7	92 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	GP9	P14770	177 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	SUMO1	P63165	101 aa	Known RBP	13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	CFHR3	Q02985	330 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	C2CD4C	Q8TF44	421 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	GNB4	Q9HAV0	340 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	TRBV20OR9-2	A0A075B6H5	130 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	IGHV3-35	A0A0C4DH35	117 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	HELT	A6NFD8	242 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	IGLV1-40	P01703	118 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	CXCL1	P09341	107 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	PF4V1	P10720	104 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	RPL35	P42766	123 aa	Known RBP	13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	ZNF600	Q6ZNG1	722 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	BTF3L4	Q96K17	158 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	KLK15	Q9H2R5	256 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	URGCP-MRPS24	S4R325	110 aa		13.72	□□□□□ -0.21
GEN1-208	ENST00000614478	CUBN	O60494	3623 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	JMJD1C	Q15652	2540 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	NBEAP1	P0C6P0	100 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	CRYBB3	P26998	211 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	MYCNOS	P40205	109 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	TAS2R60	P59551	318 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	OCC1	Q8TAD7	63 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	BLNK	Q8WV28	456 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	ZNF414	Q96IQ9	312 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	USMG5	Q96IX5	58 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	FAM210B	Q96KR6	192 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	ATP6V0B	Q99437	205 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	PRSS22	Q9GZN4	317 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	RNF24	Q9Y225	148 aa		13.71	□□□□□ -0.21
GEN1-208	ENST00000614478	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	RPS10	P46783	165 aa	Known RBP	13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	GALR1	P47211	349 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	DUX5	Q96PT3	197 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	ELOVL1	Q9BW60	279 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	NPFFR1	Q9GZQ6	430 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	ZNF98	A6NK75	572 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	TOMM20L	Q6UXN7	152 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	LURAP1L	Q8IV03	231 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	SFRP2	Q96HF1	295 aa		13.7	□□□□□ -0.22
GEN1-208	ENST00000614478	PPP5D1	E7EU14	171 aa		13.69	□□□□□ -0.22
GEN1-208	ENST00000614478	KCNIP4	Q6PIL6	250 aa		13.69	□□□□□ -0.22
GEN1-208	ENST00000614478	LCNL1	Q6ZST4	164 aa		13.69	□□□□□ -0.22
GEN1-208	ENST00000614478	ZNF329	Q86UD4	541 aa		13.69	□□□□□ -0.22
GEN1-208	ENST00000614478	BPIFA4P	Q86YQ2	179 aa		13.69	□□□□□ -0.22
GEN1-208	ENST00000614478	ZNF702P	Q9H963	129 aa		13.69	□□□□□ -0.22
GEN1-208	ENST00000614478	RABAC1	Q9UI14	185 aa		13.69	□□□□□ -0.22
GEN1-208	ENST00000614478	BMPR1B	O00238	502 aa		13.68	□□□□□ -0.22
GEN1-208	ENST00000614478	GNG4	P50150	75 aa		13.68	□□□□□ -0.22
GEN1-208	ENST00000614478	RAB9A	P51151	201 aa		13.68	□□□□□ -0.22
GEN1-208	ENST00000614478	RAN	P62826	216 aa	Known RBP	13.68	□□□□□ -0.22
GEN1-208	ENST00000614478	ZFAND3	Q9H8U3	227 aa		13.68	□□□□□ -0.22
GEN1-208	ENST00000614478	NF1	P21359	2839 aa		13.68	□□□□□ -0.22
GEN1-208	ENST00000614478	IGHV3OR16-8	A0A075B7F1	116 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	GGCT	O75223	188 aa	Known RBP	13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	HIST1H1E	P10412	219 aa	Known RBP	13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	S100A7	P31151	101 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	FOXL1	Q12952	345 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	TEX38	Q6PEX7	206 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478		H3BTX0	84 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	IGHV3-11	P01762	117 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	IGHG4	P01861	327 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	S100A9	P06702	114 aa	Known RBP	13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	CNN1	P51911	297 aa	Known RBP	13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	REL	Q04864	619 aa	Predicted RBP	13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	TMEM86B	Q8N661	226 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	OR10G8	Q8NGN5	311 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478	ZNF586	Q9NXT0	402 aa		13.67	□□□□□ -0.22
GEN1-208	ENST00000614478		A0A0G2JLM5	398 aa		13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	PSMB8	P28062	276 aa		13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	ARL3	P36405	182 aa		13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	CENPW	Q5EE01	88 aa		13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	ZFP82	Q8N141	532 aa		13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	OR4F17	Q8NGA8	305 aa		13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	ZNF418	Q8TF45	676 aa	Predicted RBP	13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	SRD5A3	Q9H8P0	318 aa		13.66	□□□□□ -0.22
GEN1-208	ENST00000614478	TRAV9-1	A0A075B6T8	112 aa		13.65	□□□□□ -0.22
GEN1-208	ENST00000614478	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms