RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 IL15RAQ13261 267 aa5.63□□□□□ -1.51
CLCN3-211ENST00000613795 C9orf106Q8NAJ2 232 aa5.63□□□□□ -1.51
CLCN3-211ENST00000613795 TRIP12Q14669 1992 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-211ENST00000613795 TRAV40A0A0B4J280 105 aa5.63□□□□□ -1.51
CLCN3-211ENST00000613795 TGFBR3LH3BV60 316 aa5.63□□□□□ -1.51
CLCN3-211ENST00000613795 NTF4P34130 210 aa5.63□□□□□ -1.51
CLCN3-211ENST00000613795 MCRIP2Q9BUT9 160 aaKnown RBP5.63□□□□□ -1.51
CLCN3-211ENST00000613795 SCRT1Q9BWW7 348 aa5.63□□□□□ -1.51
CLCN3-211ENST00000613795 SPAG17Q6Q759 2223 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 IGKV1-12A0A0C4DH73 117 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 M0R1W7 72 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 TAX1BP3O14907 124 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 ZNHIT1O43257 154 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 IGKV1D-12P01611 117 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 CTSBP07858 339 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 CRYGSP22914 178 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 Q86TA4 180 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 MRPL20Q9BYC9 149 aaKnown RBP5.62□□□□□ -1.51
CLCN3-211ENST00000613795 PDE4DIPQ5VU43 2346 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 NPYP01303 97 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 FAM27E3Q08E93 113 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 LY6EQ16553 131 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 IGKV3-15P01624 115 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 HAPLN4Q86UW8 402 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 Q8N8P6 123 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 ZNRF1Q8ND25 227 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 PHLDA1Q8WV24 401 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-211ENST00000613795 PRO1854Q9UHT4 67 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 VWC2LB2RUY7 222 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 SH2D1AO60880 128 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 ZNF415Q09FC8 603 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 SPACA3Q8IXA5 215 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 AMN1Q8IY45 258 aa5.62□□□□□ -1.51
CLCN3-211ENST00000613795 PRRC2BQ5JSZ5 2229 aaKnown RBP5.62□□□□□ -1.51
CLCN3-211ENST00000613795 VCYO14598 125 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 ATP1A1-AS1Q5TC04 95 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 FAM104BQ5XKR9 115 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 FOXI2Q6ZQN5 318 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 TMEM86BQ8N661 226 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 TMEM105Q8N8V8 129 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 DPH3P1Q9H4G8 78 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 PDCD11Q14690 1871 aaKnown RBP5.61□□□□□ -1.51
CLCN3-211ENST00000613795 PRSS46E5RG02 174 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 SOCS3O14543 225 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 TCF15Q12870 199 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 Q6ZVH6 145 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 PAX9P55771 341 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 C5orf47Q569G3 176 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 SCRT2Q9NQ03 307 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 COLCA1Q6ZS62 124 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 RCHY1Q96PM5 261 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 SCN3AQ9NY46 2000 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 IGHV1-18A0A0C4DH31 117 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 SHISA9B4DS77 424 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 TMEM75Q8N9X5 138 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 TMEM167AQ8TBQ9 72 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 RASL10AQ92737 203 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 DUX3Q96PT4 197 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 C7orf69Q9H7B7 122 aa5.61□□□□□ -1.51
CLCN3-211ENST00000613795 A0A0G2JRQ6 117 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 WNT2P09544 360 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 SRD5A1P18405 259 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 RNASE4P34096 147 aaKnown RBP5.6□□□□□ -1.51
CLCN3-211ENST00000613795 TMEM42Q69YG0 159 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 LSM4Q9Y4Z0 139 aaKnown RBP5.6□□□□□ -1.51
CLCN3-211ENST00000613795 IGLL5B9A064 214 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 CD59P13987 128 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 RBX1P62877 108 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 WFDC12Q8WWY7 111 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 LEPROTO15243 131 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 FGF6P10767 208 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 EFNA4P52798 201 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 FOXL2NBQ6ZUU3 175 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 FAM216BQ8N7L0 139 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 FXYD7P58549 80 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 MRAPQ8TCY5 172 aa5.6□□□□□ -1.51
CLCN3-211ENST00000613795 NPIPB5A8MRT5 1133 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 ATOX1O00244 68 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 PRSS57Q6UWY2 283 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 TEN1Q86WV5 123 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 METRNQ9UJH8 293 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 LCTP09848 1927 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 MTCL1Q9Y4B5 1905 aaKnown RBP5.59□□□□□ -1.51
CLCN3-211ENST00000613795 IGKV1-27A0A075B6S5 117 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 K7ERJ3 54 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 ARMS2P0C7Q2 107 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 FOXF2Q12947 444 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 LINC01545Q5VT33 79 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 TIMM21Q9BVV7 248 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 HIGD1BQ9P298 99 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 TRBV7-1A0A0A6YYK4 115 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 PLAURQ03405 335 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 RBMY1FQ15415 496 aaKnown RBP5.59□□□□□ -1.51
CLCN3-211ENST00000613795 Q6ZRM9 215 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 ZNF747Q9BV97 191 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 TOMM7Q9P0U1 55 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 SPRR3Q9UBC9 169 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 FAM223BA6NKX1 122 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms