RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 UFC1Q9Y3C8 167 aa13.4□□□□□ -0.26
SREK1-216ENST00000612404 CCL24O00175 119 aa13.4□□□□□ -0.26
SREK1-216ENST00000612404 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
SREK1-216ENST00000612404 NDUFA5Q16718 116 aa13.4□□□□□ -0.26
SREK1-216ENST00000612404 HAGHQ16775 308 aa13.4□□□□□ -0.26
SREK1-216ENST00000612404 C1QL4Q86Z23 238 aa13.4□□□□□ -0.26
SREK1-216ENST00000612404 OR8I2Q8N0Y5 310 aa13.4□□□□□ -0.26
SREK1-216ENST00000612404 ADARB2-AS1A8MUL3 147 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 BUB3O43684 328 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 PSMB3P49720 205 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 NDUFA11Q86Y39 141 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 RNF24Q9Y225 148 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 GP9P14770 177 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 REC114Q7Z4M0 266 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 EIF5A2Q9GZV4 153 aaKnown RBP13.39□□□□□ -0.27
SREK1-216ENST00000612404 MED9Q9NWA0 146 aa13.39□□□□□ -0.27
SREK1-216ENST00000612404 K7EMT4 169 aa13.38□□□□□ -0.27
SREK1-216ENST00000612404 LGALS9O00182 355 aa13.38□□□□□ -0.27
SREK1-216ENST00000612404 UBE2G2P60604 165 aa13.38□□□□□ -0.27
SREK1-216ENST00000612404 TOR2AQ5JU69 321 aa13.38□□□□□ -0.27
SREK1-216ENST00000612404 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
SREK1-216ENST00000612404 IGHV7-4-1A0A0J9YVY3 117 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 IFNA1P01562 189 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 EDN2P20800 178 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 BLNKQ8WV28 456 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 DLX4Q92988 240 aaPredicted RBP13.37□□□□□ -0.27
SREK1-216ENST00000612404 FXYD5Q96DB9 178 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 TMEM14CQ9P0S9 112 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 U3KQE9 123 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 H3BTX0 84 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 RPL7P18124 248 aaKnown RBP13.37□□□□□ -0.27
SREK1-216ENST00000612404 FHL3Q13643 280 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 GUK1Q16774 197 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 OR4F17Q8NGA8 305 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 OR4F4Q96R69 305 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 RARRES2Q99969 163 aa13.37□□□□□ -0.27
SREK1-216ENST00000612404 A0A1W2PS18 150 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 TMEM213A2RRL7 107 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 RBFOX3A6NFN3 312 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 A8MWP6 167 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 ATP6V1G1O75348 118 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 PPT1P50897 306 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 CITED4Q96RK1 184 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 RHPN1-AS1Q9BWJ2 59 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 TMEM231Q9H6L2 316 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 MANBALQ9NQG1 85 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 RAB19A4D1S5 217 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 PAGE4O60829 102 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 NBEAP1P0C6P0 100 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 BCL2P10415 239 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 SRSF3P84103 164 aaKnown RBP13.36□□□□□ -0.27
SREK1-216ENST00000612404 SMPXQ9UHP9 88 aa13.36□□□□□ -0.27
SREK1-216ENST00000612404 COL6A5A8TX70 2615 aa13.35□□□□□ -0.27
SREK1-216ENST00000612404 H3BQ15 152 aa13.35□□□□□ -0.27
SREK1-216ENST00000612404 CST9LP1Q5W188 147 aa13.35□□□□□ -0.27
SREK1-216ENST00000612404 GPR82Q96P67 336 aa13.35□□□□□ -0.27
SREK1-216ENST00000612404 CITED1Q99966 193 aa13.35□□□□□ -0.27
SREK1-216ENST00000612404 SELENOKQ9Y6D0 94 aa13.35□□□□□ -0.27
SREK1-216ENST00000612404 MRPS12O15235 138 aaKnown RBP13.34□□□□□ -0.27
SREK1-216ENST00000612404 HIST1H1EP10412 219 aaKnown RBP13.34□□□□□ -0.27
SREK1-216ENST00000612404 GALR1P47211 349 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 PMS2P11Q13670 270 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 C16orf54Q6UWD8 224 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 OR9G4Q8NGQ1 327 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 PEMTQ9UBM1 199 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 C2orf70A6NJV1 201 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 CHEK1O14757 476 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 IGLC2P0DOY2 106 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 ATF4P18848 351 aaPredicted RBP13.34□□□□□ -0.27
SREK1-216ENST00000612404 SUN5Q8TC36 379 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 RXFP4Q8TDU9 374 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 ELOVL1Q9BW60 279 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 TREM1Q9NP99 234 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 ZNF586Q9NXT0 402 aa13.34□□□□□ -0.27
SREK1-216ENST00000612404 YTHDF2Q9Y5A9 579 aaKnown RBP13.34□□□□□ -0.27
SREK1-216ENST00000612404 STAB1Q9NY15 2570 aa13.33□□□□□ -0.27
SREK1-216ENST00000612404 LOC102723971A0A1B0GUV8 181 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 ZNF785A8K8V0 405 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 BMI1P35226 326 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 MYCNOSP40205 109 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 SIGLEC15Q6ZMC9 328 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 TMEM158Q8WZ71 300 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 C17orf77Q96MU5 243 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 VAX2Q9UIW0 290 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 SMAD5-AS1Q9Y6J3 95 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 VWFP04275 2813 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 FOLR2P14207 255 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 CBLN1P23435 193 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 RANP62826 216 aaKnown RBP13.33□□□□□ -0.28
SREK1-216ENST00000612404 RPL11P62913 178 aaKnown RBP13.33□□□□□ -0.28
SREK1-216ENST00000612404 ICAM4Q14773 271 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 ZNF506Q5JVG8 444 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 GLMPQ8WWB7 406 aa13.33□□□□□ -0.28
SREK1-216ENST00000612404 FAM74A7A6NL05 159 aa13.32□□□□□ -0.28
SREK1-216ENST00000612404 PF4P02776 101 aa13.32□□□□□ -0.28
SREK1-216ENST00000612404 PEA15Q15121 130 aa13.32□□□□□ -0.28
SREK1-216ENST00000612404 C11orf94C9JXX5 98 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms