RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SLC25A22Q9H936 323 aa12.64□□□□□ -0.39
SSBP1-215ENST00000612337 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
SSBP1-215ENST00000612337 NAP1L6A6NFF2 107 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 PRSS29PA6NIE9 313 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 ORM2P19652 201 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 S100A7P31151 101 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 INPP1P49441 399 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
SSBP1-215ENST00000612337 RRN3P1Q2M238 152 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 TRIQKQ629K1 86 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 UBE2DNLQ8IWF7 75 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 OR1B1Q8NGR6 318 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 GPR82Q96P67 336 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 SDHCQ99643 169 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-215ENST00000612337 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
SSBP1-215ENST00000612337 HOXB5P09067 269 aa12.62□□□□□ -0.39
SSBP1-215ENST00000612337 GATA2P23769 480 aaPredicted RBP12.62□□□□□ -0.39
SSBP1-215ENST00000612337 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
SSBP1-215ENST00000612337 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.62□□□□□ -0.39
SSBP1-215ENST00000612337 TMEM182Q6ZP80 229 aaPredicted RBP12.62□□□□□ -0.39
SSBP1-215ENST00000612337 IGF2BP2-AS1Q96M15 143 aa12.62□□□□□ -0.39
SSBP1-215ENST00000612337 TMEM147Q9BVK8 224 aa12.62□□□□□ -0.39
SSBP1-215ENST00000612337 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
SSBP1-215ENST00000612337 NDUFB6O95139 128 aa12.61□□□□□ -0.39
SSBP1-215ENST00000612337 AKR1C1Q04828 323 aa12.61□□□□□ -0.39
SSBP1-215ENST00000612337 ACOT7LQ6ZUV0 252 aa12.61□□□□□ -0.39
SSBP1-215ENST00000612337 TMEM208Q9BTX3 173 aa12.61□□□□□ -0.39
SSBP1-215ENST00000612337 STRAPQ9Y3F4 350 aaKnown RBP12.61□□□□□ -0.39
SSBP1-215ENST00000612337 H3BP45 60 aa12.6□□□□□ -0.39
SSBP1-215ENST00000612337 DUSP14O95147 198 aaKnown RBP12.6□□□□□ -0.39
SSBP1-215ENST00000612337 HTN3P15516 51 aa12.6□□□□□ -0.39
SSBP1-215ENST00000612337 RNF212Q495C1 297 aa12.6□□□□□ -0.39
SSBP1-215ENST00000612337 Q6ZR54 194 aa12.6□□□□□ -0.39
SSBP1-215ENST00000612337 TMEM144Q7Z5S9 345 aa12.6□□□□□ -0.39
SSBP1-215ENST00000612337 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 TRAV8-2A0A0B4J237 113 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 C9orf170A2RU37 121 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
SSBP1-215ENST00000612337 DAD1P61803 113 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 ID3Q02535 119 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 OR11H7Q8NGC8 314 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
SSBP1-215ENST00000612337 CENPXA8MT69 81 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 H3BRN7 92 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 INSP01308 110 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 MED14OSP0DP75 135 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 BTCP35070 178 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 IGFL4Q6B9Z1 124 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 TMEM88Q6PEY1 159 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 CYP2G1PQ6ZSU1 146 aa12.58□□□□□ -0.4
SSBP1-215ENST00000612337 SLC25A39Q9BZJ4 359 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-215ENST00000612337 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 ABCA13Q86UQ4 5058 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 M0R2Z0 102 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
SSBP1-215ENST00000612337 IL5P05113 134 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 IL7P13232 177 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 B2MP61769 119 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 POLR2GP62487 172 aaKnown RBP eCLIP12.57□□□□□ -0.4
SSBP1-215ENST00000612337 SPINK13Q1W4C9 94 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 RNF182Q8N6D2 247 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 SHANK2-AS3Q9BTD1 123 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 HIGD1AQ9Y241 93 aa12.57□□□□□ -0.4
SSBP1-215ENST00000612337 SMCO3A2RU48 225 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 LYRM9A8MSI8 78 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 ADAP1O75689 374 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 OR4E1P0C645 316 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 RPL7P18124 248 aaKnown RBP12.56□□□□□ -0.4
SSBP1-215ENST00000612337 PLP1P60201 277 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 RAP2BP61225 183 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 FGL1Q08830 312 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 C15orf53Q8NAA6 179 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
SSBP1-215ENST00000612337 LRP1BQ9NZR2 4599 aa12.55□□□□□ -0.4
SSBP1-215ENST00000612337 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
SSBP1-215ENST00000612337 ZNF705GA8MUZ8 300 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-215ENST00000612337 HYPMO75409 117 aa12.55□□□□□ -0.4
SSBP1-215ENST00000612337 TSPOP30536 169 aa12.55□□□□□ -0.4
SSBP1-215ENST00000612337 SELENOTP62341 195 aa12.55□□□□□ -0.4
SSBP1-215ENST00000612337 ZNF738Q8NE65 137 aa12.55□□□□□ -0.4
SSBP1-215ENST00000612337 HSPG2P98160 4391 aa12.55□□□□□ -0.4
SSBP1-215ENST00000612337 BOLA2-SMG1P6H3BVE0 249 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 SSSCA1O60232 199 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 PRM2P04554 102 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 LINC00869P0C866 280 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 ANXA7P20073 488 aaKnown RBP12.54□□□□□ -0.4
SSBP1-215ENST00000612337 FAM3BP58499 235 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-215ENST00000612337 CNPY1Q3B7I2 92 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 SOHLH1Q5JUK2 328 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 BAP18Q8IXM2 172 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 SMIM8Q96KF7 97 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 MUC4Q99102 2169 aa12.54□□□□□ -0.4
SSBP1-215ENST00000612337 A0A087X0K7 114 aa12.53□□□□□ -0.4
SSBP1-215ENST00000612337 PLA2G10O15496 165 aa12.53□□□□□ -0.4
SSBP1-215ENST00000612337 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
SSBP1-215ENST00000612337 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
SSBP1-215ENST00000612337 UHRF2Q96PU4 802 aa12.53□□□□□ -0.4
SSBP1-215ENST00000612337 TRAV12-2A0A075B6T6 113 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms