RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 OR4X2Q8NGF9 303 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 H7C2G1 150 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 MMP23AO75900 390 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 ZNF833PQ6ZTB9 187 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 SPACA3Q8IXA5 215 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 ZNF138P52744 262 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 KLRD1Q13241 179 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 MED13Q9UHV7 2174 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 NPIPB6E9PJ23 425 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 RPL15P61313 204 aaKnown RBP10.05□□□□□ -0.8
CDH1-212ENST00000611625 PRR20EP86478 221 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 PRR20CP86479 221 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 PRR20DP86480 221 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 PRR20BP86481 221 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 PRR20AP86496 221 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 C5orf64Q2M2E5 130 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 DMRTC2Q8IXT2 367 aaPredicted RBP10.05□□□□□ -0.8
CDH1-212ENST00000611625 SMIM12Q96EX1 92 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 DENND4AQ7Z401 1863 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 RAXQ9Y2V3 346 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 TMEM131Q92545 1883 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 NCR2O95944 276 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 POU2AF1Q16633 256 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 TMEM155Q4W5P6 130 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 LYPD1Q8N2G4 141 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 SLC25A2Q9BXI2 301 aa10.05□□□□□ -0.8
CDH1-212ENST00000611625 IGLV3-9A0A075B6K5 115 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 PSG3Q16557 428 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 C3orf36Q3SXR2 165 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
CDH1-212ENST00000611625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDH1-212ENST00000611625 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 EVI2AP22794 236 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
CDH1-212ENST00000611625 SEC11AP67812 179 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 MPV17L2Q567V2 206 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 ZGRF1Q86YA3 2104 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 A0A0G2JLM5 398 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 F2Z2F3 143 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 C11orf1Q9H5F2 150 aa10.04□□□□□ -0.8
CDH1-212ENST00000611625 DPM2O94777 84 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 NDUFA3O95167 84 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 PRSS2P07478 247 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 C15orf32Q32M92 178 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 FAM231DQ6ZW35 169 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 ZNF492Q9P255 531 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 LDLRAD2Q5SZI1 272 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 Q8TAT8 98 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 FNDC4Q9H6D8 234 aaPredicted RBP10.03□□□□□ -0.8
CDH1-212ENST00000611625 SRRM4A7MD48 611 aaKnown RBP10.03□□□□□ -0.8
CDH1-212ENST00000611625 SLAQ13239 276 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 SHANK2-AS3Q9BTD1 123 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 GFRA4Q9GZZ7 299 aa10.03□□□□□ -0.8
CDH1-212ENST00000611625 E7EQL1 145 aa10.02□□□□□ -0.8
CDH1-212ENST00000611625 HSD52Q0P140 79 aa10.02□□□□□ -0.8
CDH1-212ENST00000611625 CRIP3Q6Q6R5 217 aa10.02□□□□□ -0.8
CDH1-212ENST00000611625 VMO1Q7Z5L0 202 aa10.02□□□□□ -0.8
CDH1-212ENST00000611625 SH2D1AO60880 128 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
CDH1-212ENST00000611625 CEACAM4O75871 244 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 CT83Q5H943 113 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 TEX36Q5VZQ5 186 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 LSM4Q9Y4Z0 139 aaKnown RBP10.02□□□□□ -0.81
CDH1-212ENST00000611625 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 K7EN84 100 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 ARMS2P0C7Q2 107 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 COL8A2P25067 703 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
CDH1-212ENST00000611625 DDB2Q92466 427 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 MCRIP2Q9BUT9 160 aaKnown RBP10.02□□□□□ -0.81
CDH1-212ENST00000611625 MRPL16Q9NX20 251 aaKnown RBP10.02□□□□□ -0.81
CDH1-212ENST00000611625 JKAMPQ9P055 326 aa10.02□□□□□ -0.81
CDH1-212ENST00000611625 MUC22E2RYF6 1773 aaPredicted RBP10.02□□□□□ -0.81
CDH1-212ENST00000611625 SMIM27A0A1W2PRY6 76 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 PAPPA-AS1Q5QFB9 102 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 AMMECR1LQ6DCA0 310 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 OR9G4Q8NGQ1 327 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 COX6CP09669 75 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 LOXP28300 417 aaPredicted RBP10.01□□□□□ -0.81
CDH1-212ENST00000611625 ARL6IP6Q8N6S5 226 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 CCL19Q99731 98 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 MRPS16Q9Y3D3 137 aaKnown RBP10.01□□□□□ -0.81
CDH1-212ENST00000611625 NOTCH3Q9UM47 2321 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 A0A087X0K7 114 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 SNCGO76070 127 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 IGLC2P0DOY2 106 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 IGLC3P0DOY3 106 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 CNTFRP26992 372 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 OR2K2Q8NGT1 345 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 SRSF8Q9BRL6 282 aaKnown RBP10.01□□□□□ -0.81
CDH1-212ENST00000611625 TRAV21A0A0B4J279 112 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 FAM231BA6NCW3 169 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 CEACAM8P31997 349 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms