RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LOC105371242A0A075B767 164 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 IGLC7A0M8Q6 106 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 GATA4P43694 442 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 VSTM2AQ8TAG5 236 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 HILPDAQ9Y5L2 63 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 INSIG2Q9Y5U4 225 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 APOHP02749 345 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-216ENST00000610401 C7orf69Q9H7B7 122 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 RELQ04864 619 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-216ENST00000610401 LDLRAD2Q5SZI1 272 aa16.28■□□□□ 0.2
SSBP3-216ENST00000610401 NCR2O95944 276 aa16.27■□□□□ 0.2
SSBP3-216ENST00000610401 FAM120AOSQ5T036 256 aa16.27■□□□□ 0.2
SSBP3-216ENST00000610401 PRSS3P2Q8NHM4 247 aa16.27■□□□□ 0.2
SSBP3-216ENST00000610401 HIGD1AQ9Y241 93 aa16.27■□□□□ 0.19
SSBP3-216ENST00000610401 LOXL1Q08397 574 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-216ENST00000610401 TM4SF20Q53R12 229 aa16.26■□□□□ 0.19
SSBP3-216ENST00000610401 RBPMS2Q6ZRY4 209 aaKnown RBP16.26■□□□□ 0.19
SSBP3-216ENST00000610401 FAM231DQ6ZW35 169 aa16.26■□□□□ 0.19
SSBP3-216ENST00000610401 C5orf17Q8NAS9 161 aa16.26■□□□□ 0.19
SSBP3-216ENST00000610401 SLC25A34Q6PIV7 304 aa16.26■□□□□ 0.19
SSBP3-216ENST00000610401 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.26■□□□□ 0.19
SSBP3-216ENST00000610401 A0A1B0GXF2 115 aa16.26■□□□□ 0.19
SSBP3-216ENST00000610401 ORAOV1Q8WV07 137 aa16.26■□□□□ 0.19
SSBP3-216ENST00000610401 MAP1LC3CQ9BXW4 147 aa16.26■□□□□ 0.19
SSBP3-216ENST00000610401 MRPS16Q9Y3D3 137 aaKnown RBP16.26■□□□□ 0.19
SSBP3-216ENST00000610401 SMKR1H3BMG3 65 aa16.25■□□□□ 0.19
SSBP3-216ENST00000610401 TMEM178BH3BS89 294 aa16.25■□□□□ 0.19
SSBP3-216ENST00000610401 VPS25Q9BRG1 176 aa16.25■□□□□ 0.19
SSBP3-216ENST00000610401 LOXP28300 417 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-216ENST00000610401 RASL11BQ9BPW5 248 aa16.25■□□□□ 0.19
SSBP3-216ENST00000610401 TMEM133Q9H2Q1 129 aa16.25■□□□□ 0.19
SSBP3-216ENST00000610401 C16orf97H3BN30 126 aa16.24■□□□□ 0.19
SSBP3-216ENST00000610401 GP9P14770 177 aa16.24■□□□□ 0.19
SSBP3-216ENST00000610401 FCGR2BP31994 310 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-216ENST00000610401 WIPF2Q8TF74 440 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-216ENST00000610401 C8orf49Q96NF6 230 aa16.24■□□□□ 0.19
SSBP3-216ENST00000610401 A0A0G2JNJ9 132 aa16.24■□□□□ 0.19
SSBP3-216ENST00000610401 SLC25A39Q9BZJ4 359 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-216ENST00000610401 Q9UFV3 132 aa16.24■□□□□ 0.19
SSBP3-216ENST00000610401 IGHV1-69-2A0A0G2JMI3 117 aa16.24■□□□□ 0.19
SSBP3-216ENST00000610401 HES1Q14469 280 aa16.24■□□□□ 0.19
SSBP3-216ENST00000610401 MRPL52Q86TS9 123 aaKnown RBP16.24■□□□□ 0.19
SSBP3-216ENST00000610401 TMEM213A2RRL7 107 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 IGHV1-8P0DP01 117 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 RAB37Q96AX2 223 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 TMEM186Q96B77 213 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 CHRDL1Q9BU40 450 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 MLST8Q9BVC4 326 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 TMEM191AQ9H0A3 160 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 MUC6Q6W4X9 2439 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 MYCNOSP40205 109 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 ARF6P62330 175 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 RBX1P62877 108 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 KLF5Q13887 457 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-216ENST00000610401 PRSS57Q6UWY2 283 aa16.23■□□□□ 0.19
SSBP3-216ENST00000610401 OR2J3O76001 311 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 IFI27P40305 119 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-216ENST00000610401 IL4P05112 153 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 TMEM11P17152 192 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 TEX36Q5VZQ5 186 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 Q86TA4 180 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 TOMM40O96008 361 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 LTAP01374 205 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 MRGPRG-AS1Q2M3A8 158 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 FA2HQ7L5A8 372 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 ONECUT1Q9UBC0 465 aa16.22■□□□□ 0.19
SSBP3-216ENST00000610401 PRR30Q53SZ7 412 aaPredicted RBP16.21■□□□□ 0.19
SSBP3-216ENST00000610401 IGFL2Q6UWQ7 119 aa16.21■□□□□ 0.19
SSBP3-216ENST00000610401 C18orf15Q96N68 181 aa16.21■□□□□ 0.19
SSBP3-216ENST00000610401 PPP1R27Q86WC6 154 aa16.21■□□□□ 0.19
SSBP3-216ENST00000610401 C8orf46Q8TAG6 207 aa16.21■□□□□ 0.19
SSBP3-216ENST00000610401 AP5S1Q9NUS5 200 aa16.21■□□□□ 0.19
SSBP3-216ENST00000610401 SIGLEC9Q9Y336 463 aa16.21■□□□□ 0.19
SSBP3-216ENST00000610401 OR5AL1P0C617 328 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 BVES-AS1Q5T3Y7 98 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 THAP8Q8NA92 274 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 Q8TAT8 98 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 RPEQ96AT9 228 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 FMC1Q96HJ9 113 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 F11RQ9Y624 299 aaKnown RBP16.2■□□□□ 0.18
SSBP3-216ENST00000610401 IGHV3OR16-13A0A075B7E8 117 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 IGHV3-74A0A0B4J1X5 117 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 TAX1BP3O14907 124 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 NHLH1Q02575 133 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 PPIFP30405 207 aaKnown RBP16.2■□□□□ 0.18
SSBP3-216ENST00000610401 AMN1Q8IY45 258 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 STXBP6Q8NFX7 210 aa16.2■□□□□ 0.18
SSBP3-216ENST00000610401 SPG11Q96JI7 2443 aa16.19■□□□□ 0.18
SSBP3-216ENST00000610401 A0A1B0GUT8 65 aa16.19■□□□□ 0.18
SSBP3-216ENST00000610401 C19orf71A6NCJ1 209 aa16.19■□□□□ 0.18
SSBP3-216ENST00000610401 THBDP07204 575 aa16.19■□□□□ 0.18
SSBP3-216ENST00000610401 RASL11AQ6T310 242 aa16.19■□□□□ 0.18
SSBP3-216ENST00000610401 TMEM75Q8N9X5 138 aa16.19■□□□□ 0.18
SSBP3-216ENST00000610401 ATP5L2Q7Z4Y8 100 aa16.18■□□□□ 0.18
SSBP3-216ENST00000610401 PRSS22Q9GZN4 317 aa16.18■□□□□ 0.18
SSBP3-216ENST00000610401 D6R8Y8 96 aa16.18■□□□□ 0.18
SSBP3-216ENST00000610401 MEF2CQ06413 473 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-216ENST00000610401 FAM169BQ8N8A8 192 aa16.18■□□□□ 0.18
SSBP3-216ENST00000610401 IGKV2-40A0A087WW87 121 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-216ENST00000610401 TRAV8-6A0A0B4J262 113 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms