RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 NUP214P35658 2090 aaPredicted RBP3.49□□□□□ -1.85
TUBE1-209ENST00000604814 A0A087WYN8 130 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 LSM3P62310 102 aaKnown RBP3.49□□□□□ -1.85
TUBE1-209ENST00000604814 KLRD1Q13241 179 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 CDK5R1Q15078 307 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 PATE2Q6UY27 113 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 ATOH7Q8N100 152 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 C9orf62Q8N4C0 152 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 MUC7Q8TAX7 377 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 FGF13Q92913 245 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 TAS2R8Q9NYW2 309 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 DLC1Q96QB1 1528 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 ZNF407Q9C0G0 2248 aa3.49□□□□□ -1.85
TUBE1-209ENST00000604814 IGHV3-15A0A0B4J1V0 119 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 C17orf98A8MV24 154 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 H3BQ85 93 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 KLF7O75840 302 aaPredicted RBP3.48□□□□□ -1.85
TUBE1-209ENST00000604814 MPC2O95563 127 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 TNFP01375 233 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 IGKV3-20P01619 116 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 BRS3P32247 399 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 C14orf177Q52M58 125 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 Q5W150 140 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 Q6ZQT7 251 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 C5orf17Q8NAS9 161 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 FKBP11Q9NYL4 201 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 LSM2Q9Y333 95 aaKnown RBP3.48□□□□□ -1.85
TUBE1-209ENST00000604814 KDM5CP41229 1560 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 OBSL1O75147 1896 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 NCKAP5O14513 1909 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 PLXNB1O43157 2135 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 TRAV12-2A0A075B6T6 113 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 ZNF861PO60384 105 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 OR1I1O60431 355 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 MSMBP08118 114 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 ZNF705BP0CI00 300 aaPredicted RBP3.48□□□□□ -1.85
TUBE1-209ENST00000604814 TPT1P13693 172 aaKnown RBP3.48□□□□□ -1.85
TUBE1-209ENST00000604814 FOXA1P55317 472 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.48□□□□□ -1.85
TUBE1-209ENST00000604814 FAM216BQ8N7L0 139 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 SEC11CQ9BY50 192 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 TNFRSF19Q9NS68 423 aa3.48□□□□□ -1.85
TUBE1-209ENST00000604814 CABIN1Q9Y6J0 2220 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 ZFYVE16Q7Z3T8 1539 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 COL5A2P05997 1499 aaPredicted RBP3.47□□□□□ -1.85
TUBE1-209ENST00000604814 IGLV3-9A0A075B6K5 115 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 A0A0D9SG52 128 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 PHOX2AO14813 284 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 SPINK8P0C7L1 97 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 MRPS36P82909 103 aaKnown RBP3.47□□□□□ -1.85
TUBE1-209ENST00000604814 ZNF117Q03924 483 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 EBI3Q14213 229 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 LGALSLQ3ZCW2 172 aaPredicted RBP3.47□□□□□ -1.85
TUBE1-209ENST00000604814 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 MRPL54Q6P161 138 aaKnown RBP3.47□□□□□ -1.85
TUBE1-209ENST00000604814 AQP3Q92482 292 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 SLC35B3Q9H1N7 401 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 RPRMQ9NS64 109 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 ASF1BQ9NVP2 202 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 RIMBP3CA6NJZ7 1639 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 RIMBP3BA6NNM3 1639 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 POLEQ07864 2286 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 RIMBP3Q9UFD9 1639 aa3.47□□□□□ -1.85
TUBE1-209ENST00000604814 A2ML1A8K2U0 1454 aa3.46□□□□□ -1.85
TUBE1-209ENST00000604814 SBF1O95248 1867 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 TRBV20-1A0A075B6N2 111 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 TIMM17BO60830 172 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 IGLV7-43P04211 117 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 GZMBP10144 247 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 NFYAP23511 347 aaPredicted RBP3.46□□□□□ -1.86
TUBE1-209ENST00000604814 CD24P25063 80 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 FUT5Q11128 374 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 FOXF1Q12946 379 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 LINC00471Q8N535 108 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 COPS9Q8WXC6 57 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 CHCHD1Q96BP2 118 aaKnown RBP3.46□□□□□ -1.86
TUBE1-209ENST00000604814 NAA60Q9H7X0 242 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 SCP2D1Q9UJQ7 156 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 V9GYS6 101 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 ABCA7Q8IZY2 2146 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 PIK3C2AO00443 1686 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 K7EM74 188 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 SDCBPO00560 298 aaPredicted RBP3.46□□□□□ -1.86
TUBE1-209ENST00000604814 IGHV3-53P01767 116 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 MT3P25713 68 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 PCBD1P61457 104 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 RPRMLQ8N4K4 120 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 MRPS24Q96EL2 167 aaKnown RBP3.46□□□□□ -1.86
TUBE1-209ENST00000604814 AGPAT4-IT1Q9H0P7 198 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 BCL2L10Q9HD36 194 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 ZNF443Q9Y2A4 671 aaPredicted RBP3.46□□□□□ -1.86
TUBE1-209ENST00000604814 TIMM9Q9Y5J7 89 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 HSPE1-MOB4S4R3N1 261 aa3.46□□□□□ -1.86
TUBE1-209ENST00000604814 ATG2AQ2TAZ0 1938 aa3.45□□□□□ -1.86
TUBE1-209ENST00000604814 RBP4P02753 201 aa3.45□□□□□ -1.86
TUBE1-209ENST00000604814 CD3DP04234 171 aa3.45□□□□□ -1.86
TUBE1-209ENST00000604814 CRYGAP11844 174 aa3.45□□□□□ -1.86
TUBE1-209ENST00000604814 DEFA4P12838 97 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms