RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ZNF414Q96IQ9 312 aa9.94□□□□□ -0.82
CDCA3-212ENST00000604599 C18orf15Q96N68 181 aa9.94□□□□□ -0.82
CDCA3-212ENST00000604599 A0A1B0GV72 72 aa9.94□□□□□ -0.82
CDCA3-212ENST00000604599 K7EMI3 77 aa9.94□□□□□ -0.82
CDCA3-212ENST00000604599 ZNF788Q6ZQV5 615 aa9.94□□□□□ -0.82
CDCA3-212ENST00000604599 Q6ZT83 130 aa9.94□□□□□ -0.82
CDCA3-212ENST00000604599 THAP8Q8NA92 274 aa9.94□□□□□ -0.82
CDCA3-212ENST00000604599 RAI1Q7Z5J4 1906 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-212ENST00000604599 NDUFS8O00217 210 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 SPRY3O43610 288 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 HCP5Q6MZN7 132 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 COL25A1Q9BXS0 654 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-212ENST00000604599 DKK2Q9UBU2 259 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 GAGE12HA6NDE8 117 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 ZNF785A8K8V0 405 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 KLRC4-KLRK1H3BQV0 150 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 SIVA1O15304 175 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 IGLV2-11P01706 119 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 FTH1P19P0C7X4 201 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 BCL6BQ8N143 479 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-212ENST00000604599 ZCCHC24Q8N2G6 241 aaKnown RBP9.93□□□□□ -0.82
CDCA3-212ENST00000604599 FAM216BQ8N7L0 139 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 OSR1Q8TAX0 266 aaPredicted RBP9.93□□□□□ -0.82
CDCA3-212ENST00000604599 ATP6V0BQ99437 205 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 RAB9BQ9NP90 201 aa9.93□□□□□ -0.82
CDCA3-212ENST00000604599 SUB1P53999 127 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDCA3-212ENST00000604599 SMPXQ9UHP9 88 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 M0R296 226 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 SCGB1A1P11684 91 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 MZT1Q08AG7 82 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 WFDC2Q14508 124 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 MBNL2Q5VZF2 373 aaKnown RBP9.92□□□□□ -0.82
CDCA3-212ENST00000604599 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 IFI27L1Q96BM0 104 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 CCL13Q99616 98 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 VGLL1Q99990 258 aa9.92□□□□□ -0.82
CDCA3-212ENST00000604599 TMSB15BA0A087X1C1 80 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 SPAARA0A1B0GVQ0 90 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 TMEM213A2RRL7 107 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 CD300EQ496F6 205 aaPredicted RBP9.91□□□□□ -0.82
CDCA3-212ENST00000604599 MTURNQ8N3F0 131 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 PRELID3AQ96N28 172 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 TPSG1Q9NRR2 321 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 NHP2Q9NX24 153 aaKnown RBP9.91□□□□□ -0.82
CDCA3-212ENST00000604599 RPUSD1Q9UJJ7 312 aaKnown RBP9.91□□□□□ -0.82
CDCA3-212ENST00000604599 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 IGHV1-18A0A0C4DH31 117 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 HBDP02042 147 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 WFDC12Q8WWY7 111 aa9.91□□□□□ -0.82
CDCA3-212ENST00000604599 A0A1W2PPI3 338 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 TMEM189A5PLL7 270 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 CEACAM3P40198 252 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 RAB9AP51151 201 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 DIAPH2-AS1Q14236 149 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 CCDC144NLQ6NUI1 221 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 SH2D6Q7Z4S9 175 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 SMKR1H3BMG3 65 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 LYZP61626 148 aa9.9□□□□□ -0.82
CDCA3-212ENST00000604599 SMG1Q96Q15 3661 aaKnown RBP9.9□□□□□ -0.83
CDCA3-212ENST00000604599 ROS1P08922 2347 aa9.9□□□□□ -0.83
CDCA3-212ENST00000604599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.89□□□□□ -0.83
CDCA3-212ENST00000604599 SLC25A17O43808 307 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 ETDBQ3ZM63 59 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 PMS2CLQ68D20 193 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 ARPC1AQ92747 370 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 OTORQ9NRC9 128 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
CDCA3-212ENST00000604599 AGRNO00468 2067 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 MDS2Q8NDY4 140 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 CHAC1Q9BUX1 264 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 ZNF576Q9H609 170 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 LHBP01229 141 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 TNFRSF1AP19438 455 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 ZNF833PQ6ZTB9 187 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 TMEM167AQ8TBQ9 72 aa9.89□□□□□ -0.83
CDCA3-212ENST00000604599 SPENQ96T58 3664 aaKnown RBP9.89□□□□□ -0.83
CDCA3-212ENST00000604599 NDUFS7O75251 213 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 ORMDL3Q8N138 153 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 C17orf77Q96MU5 243 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 GAFA1Q96PS6 74 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 MUC3AQ02505 3323 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 INS-IGF2F8WCM5 200 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 H3BMG7 143 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 CRIP1P50238 77 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 CKS1BP61024 79 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 LYZL1Q6UWQ5 148 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 OR4C13Q8NGP0 309 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 C8orf46Q8TAG6 207 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 HIGD1AQ9Y241 93 aa9.88□□□□□ -0.83
CDCA3-212ENST00000604599 KALRNO60229 2985 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 CCL3L1P16619 93 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 AMTNQ6UX39 209 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 GATD1Q8NB37 220 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 MAFAQ8NHW3 353 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-212ENST00000604599 PHLDA1Q8WV24 401 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-212ENST00000604599 TRGV9Q99603 122 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 SPAG8Q99932 426 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-212ENST00000604599 CACNA1GO43497 2377 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 RP1L1Q8IWN7 2480 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-212ENST00000604599 J3QR89 54 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms