RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 MUC3AQ02505 3323 aa12.13□□□□□ -0.47
LYSMD4-211ENST00000604213 SVILO95425 2214 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 SAP30O75446 220 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 LYZP61626 148 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 SLC25A39Q9BZJ4 359 aaPredicted RBP12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 MEGF9Q9H1U4 602 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 A0A1B0GW15 77 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 C9orf118A6NHY6 69 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 H3BRM9 83 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 TNFRSF1AP19438 455 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 MC5RP33032 325 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 LGALS7P47929 136 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 PAX2Q02962 417 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 LOXL1Q08397 574 aaPredicted RBP12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 RPRMLQ8N4K4 120 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 RABAC1Q9UI14 185 aa12.12□□□□□ -0.47
LYSMD4-211ENST00000604213 IGHV3-72A0A0B4J1Y9 119 aa12.11□□□□□ -0.47
LYSMD4-211ENST00000604213 ENSAO43768 121 aaKnown RBP12.11□□□□□ -0.47
LYSMD4-211ENST00000604213 IFI27P40305 119 aaPredicted RBP12.11□□□□□ -0.47
LYSMD4-211ENST00000604213 ASCL2Q99929 193 aa12.11□□□□□ -0.47
LYSMD4-211ENST00000604213 FER1L6-AS1Q8NA97 138 aa12.11□□□□□ -0.47
LYSMD4-211ENST00000604213 CRYGBP07316 175 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 CD40P25942 277 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 APOBEC3AP31941 199 aaPredicted RBP12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 CRIP1P50238 77 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 BOD1L2Q8IYS8 172 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 OR8A1Q8NGG7 326 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 OR1N2Q8NGR9 330 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 NCOR1O75376 2440 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 CNTFRP26992 372 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 DLX6P56179 175 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 GTF2H5Q6ZYL4 71 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 FAM215AQ9Y5M1 114 aa12.1□□□□□ -0.47
LYSMD4-211ENST00000604213 A6NDN8 102 aa12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 LGALS9BQ3B8N2 356 aa12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 LGALS9CQ6DKI2 356 aa12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 LYPD2Q6UXB3 125 aa12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 C17orf77Q96MU5 243 aa12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 SIGLEC8Q9NYZ4 499 aa12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 F11RQ9Y624 299 aaKnown RBP12.09□□□□□ -0.47
LYSMD4-211ENST00000604213 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.47
LYSMD4-211ENST00000604213 S100A7P31151 101 aa12.08□□□□□ -0.47
LYSMD4-211ENST00000604213 PLA2G2CQ5R387 149 aa12.08□□□□□ -0.47
LYSMD4-211ENST00000604213 PSG8Q9UQ74 426 aa12.08□□□□□ -0.47
LYSMD4-211ENST00000604213 U3KQK5 164 aa12.08□□□□□ -0.47
LYSMD4-211ENST00000604213 ZFHX4Q86UP3 3567 aa12.08□□□□□ -0.48
LYSMD4-211ENST00000604213 LOC389332A0A1B0GUA5 103 aa12.08□□□□□ -0.48
LYSMD4-211ENST00000604213 K7EP34 96 aa12.08□□□□□ -0.48
LYSMD4-211ENST00000604213 NHLH1Q02575 133 aa12.08□□□□□ -0.48
LYSMD4-211ENST00000604213 Q6AWC8 147 aa12.08□□□□□ -0.48
LYSMD4-211ENST00000604213 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
LYSMD4-211ENST00000604213 TPPP3Q9BW30 176 aa12.08□□□□□ -0.48
LYSMD4-211ENST00000604213 TEX22C9J3V5 150 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 D6R8Y8 96 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 H3BUT2 72 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 TNFRSF13BO14836 293 aaPredicted RBP12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 SMAD7O15105 426 aaKnown RBP12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 FAM27E3Q08E93 113 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 NGBQ9NPG2 151 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 SIGLEC9Q9Y336 463 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 NDUFB3O43676 98 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 RIPPLY3P57055 190 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 HSD52Q0P140 79 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 SIGLEC15Q6ZMC9 328 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 HILPDAQ9Y5L2 63 aa12.07□□□□□ -0.48
LYSMD4-211ENST00000604213 A1L4Q6 167 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 G3V4G9 280 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 TMEM178BH3BS89 294 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 I3L2K1 104 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 LOXP28300 417 aaPredicted RBP12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 CACNG7P62955 275 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 RBPJQ06330 500 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 PSG3Q16557 428 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 OR9G4Q8NGQ1 327 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 TMEM190Q8WZ59 177 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 NAA38Q9BRA0 125 aaKnown RBP12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 THYN1Q9P016 225 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 SERTM2A0A1B0GWG4 89 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 SIVA1O15304 175 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 IGKV1-17P01599 117 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 PAX8Q06710 450 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 PRELID3AQ96N28 172 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 SHANK2-AS3Q9BTD1 123 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 SCNM1Q9BWG6 230 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 TMEM133Q9H2Q1 129 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 CTSZQ9UBR2 303 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 ABCA1O95477 2261 aa12.06□□□□□ -0.48
LYSMD4-211ENST00000604213 A0A0G2JLM5 398 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms