RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	PITX3	O75364	302 aa		12.61	□□□□□ -0.39
IRF3-231	ENST00000602190	GABARAP	O95166	117 aa		12.61	□□□□□ -0.39
IRF3-231	ENST00000602190	OR2F1	Q13607	317 aa		12.61	□□□□□ -0.39
IRF3-231	ENST00000602190	CLINT1	Q14677	625 aa		12.61	□□□□□ -0.39
IRF3-231	ENST00000602190	FAAP20	Q6NZ36	180 aa		12.61	□□□□□ -0.39
IRF3-231	ENST00000602190	ZNF493	Q6ZR52	646 aa		12.61	□□□□□ -0.39
IRF3-231	ENST00000602190	C15orf40	Q8WUR7	153 aa		12.61	□□□□□ -0.39
IRF3-231	ENST00000602190	VBP1	P61758	197 aa		12.6	□□□□□ -0.39
IRF3-231	ENST00000602190	ESRG	Q1W209	222 aa		12.6	□□□□□ -0.39
IRF3-231	ENST00000602190	FUNDC2	Q9BWH2	189 aa		12.6	□□□□□ -0.39
IRF3-231	ENST00000602190	EXTL2	Q9UBQ6	330 aa		12.6	□□□□□ -0.39
IRF3-231	ENST00000602190	SRRM2	Q9UQ35	2752 aa	Known RBP	12.6	□□□□□ -0.39
IRF3-231	ENST00000602190	TRAV12-2	A0A075B6T6	113 aa		12.59	□□□□□ -0.39
IRF3-231	ENST00000602190	GGNBP1	Q5YKI7	109 aa		12.59	□□□□□ -0.39
IRF3-231	ENST00000602190	TMEM263	Q8WUH6	116 aa	Known RBP	12.59	□□□□□ -0.39
IRF3-231	ENST00000602190	PPP1R14B	Q96C90	147 aa		12.59	□□□□□ -0.39
IRF3-231	ENST00000602190	PGPEP1	Q9NXJ5	209 aa		12.59	□□□□□ -0.39
IRF3-231	ENST00000602190	FAM25A	B3EWG3	89 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	FAM25C	B3EWG5	89 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	FAM25G	B3EWG6	89 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	ZNF701	M0R085	212 aa	Predicted RBP	12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	M6PR	P20645	277 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	MRPS10	P82664	201 aa	Known RBP	12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	CDPF1	Q6NVV7	123 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	MZT2A	Q6P582	158 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	TMEM182	Q6ZP80	229 aa	Predicted RBP	12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	LYZL2	Q7Z4W2	148 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	RNF182	Q8N6D2	247 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	SLC25A22	Q9H936	323 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	PRR13	Q9NZ81	148 aa		12.58	□□□□□ -0.4
IRF3-231	ENST00000602190	TRAV26-1	A0A087WT03	109 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190		H3BRN7	92 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	HOXA5	P20719	270 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	LINC00315	P59091	139 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190		Q5VSD8	79 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	IGFL4	Q6B9Z1	124 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	OR8A1	Q8NGG7	326 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	OR10J6P	Q8NGY7	276 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	SMIM4	Q8WVI0	70 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	MIXL1	Q9H2W2	232 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	NOP10	Q9NPE3	64 aa	Known RBP	12.57	□□□□□ -0.4
IRF3-231	ENST00000602190	ZNF586	Q9NXT0	402 aa		12.57	□□□□□ -0.4
IRF3-231	ENST00000602190		A0A087WXM4	84 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190		A0A087X0K7	114 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190	CXCL3	P19876	107 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190	TMEM144	Q7Z5S9	345 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190	UHRF2	Q96PU4	802 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190	LINC01587	Q99440	93 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190	C20orf144	Q9BQM9	153 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190	KCNIP3	Q9Y2W7	256 aa		12.56	□□□□□ -0.4
IRF3-231	ENST00000602190	DISC1	C4P0D8	188 aa		12.55	□□□□□ -0.4
IRF3-231	ENST00000602190	ZNF182	P17025	639 aa	Predicted RBP	12.55	□□□□□ -0.4
IRF3-231	ENST00000602190	AP3S1	Q92572	193 aa		12.55	□□□□□ -0.4
IRF3-231	ENST00000602190	CDKN1B	P46527	198 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	PLP1	P60201	277 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	CTF1	Q16619	201 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	ZNF738	Q8NE65	137 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	BPIFC	Q8NFQ6	507 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	OR1S1	Q8NH92	325 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	PRRT1	Q99946	306 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	SHANK2-AS3	Q9BTD1	123 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	VCX3A	Q9NNX9	186 aa		12.54	□□□□□ -0.4
IRF3-231	ENST00000602190	DUXB	A0A1W2PPF3	345 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190		H7BYZ3	331 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	CTDSPL	O15194	276 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	MRPS12	O15235	138 aa	Known RBP	12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	AKAIN1	P0CW23	69 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	SLC25A6	P12236	298 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	GATA2	P23769	480 aa	Predicted RBP	12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	RAB11A	P62491	216 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	OR51S1	Q8NGJ8	323 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	C18orf15	Q96N68	181 aa		12.53	□□□□□ -0.4
IRF3-231	ENST00000602190	AKR1C4	P17516	323 aa		12.52	□□□□□ -0.41
IRF3-231	ENST00000602190	S100A7	P31151	101 aa		12.52	□□□□□ -0.41
IRF3-231	ENST00000602190	SRPX	P78539	464 aa		12.52	□□□□□ -0.41
IRF3-231	ENST00000602190	HIST1H1A	Q02539	215 aa	Predicted RBP	12.52	□□□□□ -0.41
IRF3-231	ENST00000602190	OR5I1	Q13606	314 aa		12.52	□□□□□ -0.41
IRF3-231	ENST00000602190	PSG3	Q16557	428 aa		12.52	□□□□□ -0.41
IRF3-231	ENST00000602190	VSIG2	Q96IQ7	327 aa		12.52	□□□□□ -0.41
IRF3-231	ENST00000602190	TMEM147	Q9BVK8	224 aa		12.52	□□□□□ -0.41
IRF3-231	ENST00000602190		A0A096LPF7	62 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	ADAP1	O75689	374 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	RPL7	P18124	248 aa	Known RBP	12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	ORM2	P19652	201 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	KRTAP10-1	P60331	282 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	DLK1	P80370	383 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	C4orf46	Q504U0	113 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	ACOT7L	Q6ZUV0	252 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	LRTM2	Q8N967	370 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190	FRZB	Q92765	325 aa		12.51	□□□□□ -0.41
IRF3-231	ENST00000602190		A0A0J9YY99	117 aa		12.5	□□□□□ -0.41
IRF3-231	ENST00000602190	ANKRD20A5P	A0PJZ0	165 aa		12.5	□□□□□ -0.41
IRF3-231	ENST00000602190	KIR3DS1	Q14943	382 aa		12.5	□□□□□ -0.41
IRF3-231	ENST00000602190	NAA50	Q9GZZ1	169 aa	Known RBP	12.5	□□□□□ -0.41
IRF3-231	ENST00000602190	PIGBOS1	A0A0B4J2F0	54 aa		12.49	□□□□□ -0.41
IRF3-231	ENST00000602190	IAPP	P10997	89 aa		12.49	□□□□□ -0.41
IRF3-231	ENST00000602190	RHOB	P62745	196 aa		12.49	□□□□□ -0.41
IRF3-231	ENST00000602190	DAZ2	Q13117	558 aa	Known RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms