RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 NXF2Q9GZY0 626 aaKnown RBP2.76□□□□□ -1.97
VRK3-222ENST00000601324 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 AK3Q9UIJ7 227 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 RPH3ALQ9UNE2 315 aa2.76□□□□□ -1.97
VRK3-222ENST00000601324 IGHV3-21A0A0B4J1V1 117 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 TRAV3A0A0B4J244 114 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 A0A0G2JRQ6 117 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 A8MTW9 85 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 TMEM14DPA8MWL7 114 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 I3L2K1 104 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 CRTAPO75718 401 aaPredicted RBP2.75□□□□□ -1.97
VRK3-222ENST00000601324 SERPINE2P07093 398 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 HLA-DRB4P13762 266 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 HLA-GP17693 338 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 DAD1P61803 113 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 PAFAH1B2P68402 229 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 MRPL28Q13084 256 aaKnown RBP2.75□□□□□ -1.97
VRK3-222ENST00000601324 POU2AF1Q16633 256 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 OGFRL1Q5TC84 451 aaPredicted RBP2.75□□□□□ -1.97
VRK3-222ENST00000601324 GDF5OSQ5U4N7 250 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 TOMM20LQ6UXN7 152 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 LHFPL3Q86UP9 236 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 H1FOOQ8IZA3 346 aaPredicted RBP2.75□□□□□ -1.97
VRK3-222ENST00000601324 DEFB107AQ8IZN7 70 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 OR10W1Q8NGF6 305 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 OR4D5Q8NGN0 318 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 CHCHD10Q8WYQ3 142 aaPredicted RBP2.75□□□□□ -1.97
VRK3-222ENST00000601324 SLC35E1Q96K37 410 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 PGLYRP3Q96LB9 341 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 S100A13Q99584 98 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 PRRG3Q9BZD7 231 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 LPAR5Q9H1C0 372 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 BET1LQ9NYM9 111 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 HLA-DRB4X5D2U9 266 aa2.75□□□□□ -1.97
VRK3-222ENST00000601324 IGHV3-66A0A0C4DH42 116 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 LYRM9A8MSI8 78 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 TRDCB7Z8K6 153 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 DNASE2O00115 360 aaPredicted RBP2.74□□□□□ -1.97
VRK3-222ENST00000601324 SOCS1O15524 211 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 PRM2P04554 102 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 CD2P06729 351 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 LIMS3P0CW19 117 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 LIMS4P0CW20 117 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 DEFA4P12838 97 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 CRYBB3P26998 211 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 SERPINB10P48595 397 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 PPP3R1P63098 170 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 CCDC58Q4VC31 144 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 RBM48Q5RL73 367 aaKnown RBP2.74□□□□□ -1.97
VRK3-222ENST00000601324 C1orf100Q5SVJ3 147 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 C1orf146Q5VVC0 180 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 DHFR2Q86XF0 187 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 JAGN1Q8N5M9 183 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 OR4A4PQ8NGN8 299 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 VSTM2AQ8TAG5 236 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 RXFP4Q8TDU9 374 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 UQCC2Q9BRT2 126 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 GABARAPL3Q9BY60 117 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 GABARAPL1Q9H0R8 117 aa2.74□□□□□ -1.97
VRK3-222ENST00000601324 F11RQ9Y624 299 aaKnown RBP2.74□□□□□ -1.97
VRK3-222ENST00000601324 IGKV1D-8A0A087WSZ0 117 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 IGKV1D-13A0A0B4J2D9 117 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 TCRBV3S1A0A5B6 114 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 F5H768 121 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 H3BNG1 76 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 K7EQM0 130 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 UPK2O00526 184 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 FABP7O15540 132 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 CRXO43186 299 aaPredicted RBP2.73□□□□□ -1.97
VRK3-222ENST00000601324 FKBP6O75344 327 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 DCTN3O75935 186 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 FAM107AO95990 144 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 HLA-DQB1P01920 261 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 CDK1P06493 297 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 IGKV1-13P0DP09 117 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 CRHBPP24387 322 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 DEFB1P60022 68 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 DAZ2Q13117 558 aaKnown RBP2.73□□□□□ -1.97
VRK3-222ENST00000601324 ATP6AP1Q15904 470 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 SSX1Q16384 188 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 Q499Y3 187 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 RPL22L1Q6P5R6 122 aaKnown RBP2.73□□□□□ -1.97
VRK3-222ENST00000601324 AMTNQ6UX39 209 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 Q6ZS49 121 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 SCXQ7RTU7 201 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 C20orf203Q8NBC4 194 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 SMIM19Q96E16 107 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 HIST1H4GQ99525 98 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 SLC29A1Q99808 456 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 CIB1Q99828 191 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 DCSTAMPQ9H295 470 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 MED4Q9NPJ6 270 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 C12orf4Q9NQ89 552 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 DAZ3Q9NR90 486 aaKnown RBP2.73□□□□□ -1.97
VRK3-222ENST00000601324 NDUFA4L2Q9NRX3 87 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 RABAC1Q9UI14 185 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 BLOC1S6Q9UL45 172 aa2.73□□□□□ -1.97
VRK3-222ENST00000601324 MRPS7Q9Y2R9 242 aaKnown RBP2.73□□□□□ -1.97
VRK3-222ENST00000601324 RBMX2Q9Y388 322 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms