RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 A0A087WWC5 75 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 SH2D7A6NKC9 451 aaPredicted RBP8.9□□□□□ -0.98
ZNF548-211ENST00000600927 ADARB2-AS1A8MUL3 147 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 H3BQ15 152 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 H3BRN7 92 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 BMPR1BO00238 502 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 CLEC3BP05452 202 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 HIST1H1EP10412 219 aaKnown RBP8.9□□□□□ -0.98
ZNF548-211ENST00000600927 LYZP61626 148 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 CST9LP1Q5W188 147 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 BPIFA4PQ86YQ2 179 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 LYPD1Q8N2G4 141 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 ARL6IP6Q8N6S5 226 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 SDF2L1Q9HCN8 221 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 NAT8Q9UHE5 227 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 LY96Q9Y6Y9 160 aa8.9□□□□□ -0.98
ZNF548-211ENST00000600927 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 TGOLN2O43493 480 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 TRGV3P03979 118 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 IL4P05112 153 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 ELANEP08246 267 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 NBEAP1P0C6P0 100 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 CD28P10747 220 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 ADMP35318 185 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 SLC35B1P78383 322 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 TMEM241Q24JQ0 296 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 HIST2H2BDQ6DRA6 164 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 FXYD5Q96DB9 178 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 GPR82Q96P67 336 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 TMEM242Q9NWH2 141 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 DNAH3Q8TD57 4116 aa8.89□□□□□ -0.99
ZNF548-211ENST00000600927 WNK1Q9H4A3 2382 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.88□□□□□ -0.99
ZNF548-211ENST00000600927 OR2T8A6NH00 312 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 ZNF98A6NK75 572 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 UBE2L3P68036 154 aaKnown RBP8.88□□□□□ -0.99
ZNF548-211ENST00000600927 PDE6HQ13956 83 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 TCTEX1D4Q5JR98 221 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 C1orf194Q5T5A4 169 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 MORN5Q5VZ52 161 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 NDUFA11Q86Y39 141 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 RNF152Q8N8N0 203 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 C11orf44Q8N8P7 122 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 HIST1H2BAQ96A08 127 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 CCDC140Q96MF4 163 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 SMIM7Q9BQ49 75 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 PARLQ9H300 379 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 RABAC1Q9UI14 185 aa8.88□□□□□ -0.99
ZNF548-211ENST00000600927 YTHDF2Q9Y5A9 579 aaKnown RBP8.88□□□□□ -0.99
ZNF548-211ENST00000600927 TRAV5A0A0B4J249 113 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 CXorf65A6NEN9 183 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 C9JCJ5 164 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
ZNF548-211ENST00000600927 S100A9P06702 114 aaKnown RBP8.87□□□□□ -0.99
ZNF548-211ENST00000600927 GP9P14770 177 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 RPL7P18124 248 aaKnown RBP8.87□□□□□ -0.99
ZNF548-211ENST00000600927 PSMB8P28062 276 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 GPR183P32249 361 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 MYCNOSP40205 109 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 ATP5G3P48201 142 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 TPPP2P59282 170 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 TAS2R60P59551 318 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 UBE2G2P60604 165 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 FOXE3Q13461 319 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 TEX38Q6PEX7 206 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 ATRAIDQ6UW56 229 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 C10orf99Q6UWK7 81 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 OR4F17Q8NGA8 305 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 MS4A10Q96PG2 267 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 CITED2Q99967 270 aaPredicted RBP8.87□□□□□ -0.99
ZNF548-211ENST00000600927 CHRDL1Q9BU40 450 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 CTDSP1Q9GZU7 261 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 SMCO4Q9NRQ5 59 aa8.87□□□□□ -0.99
ZNF548-211ENST00000600927 PUS1Q9Y606 427 aaKnown RBP eCLIP8.87□□□□□ -0.99
ZNF548-211ENST00000600927 C7orf77A4D0Y5 90 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 M0R036 132 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 NDUFA4O00483 81 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 ZNF253O75346 499 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 NPPCP23582 126 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 MEOX2P50222 304 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 SUMO1P63165 101 aaKnown RBP8.86□□□□□ -0.99
ZNF548-211ENST00000600927 USF2Q15853 346 aaPredicted RBP8.86□□□□□ -0.99
ZNF548-211ENST00000600927 TOMM20LQ6UXN7 152 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 CLEC19AQ6UXS0 136 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 NOL4LQ96MY1 436 aaPredicted RBP8.86□□□□□ -0.99
ZNF548-211ENST00000600927 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
ZNF548-211ENST00000600927 PRKDCP78527 4128 aaKnown RBP8.86□□□□□ -0.99
ZNF548-211ENST00000600927 NOTCH1P46531 2555 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 DNASE2O00115 360 aaPredicted RBP8.85□□□□□ -0.99
ZNF548-211ENST00000600927 MRPS12O15235 138 aaKnown RBP8.85□□□□□ -0.99
ZNF548-211ENST00000600927 NDUFB4O95168 129 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 OR10J4P0C629 311 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 PF4V1P10720 104 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 CEBPGP53567 150 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 BTN1A1Q13410 526 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 MYOZ3Q8TDC0 251 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 ANAPC16Q96DE5 110 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 SMIM12Q96EX1 92 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 RPS10P5Q9NQ39 176 aa8.85□□□□□ -0.99
ZNF548-211ENST00000600927 OTORQ9NRC9 128 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms