RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 OR10J4P0C629 311 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 TAS2R60P59551 318 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 RAB4BP61018 213 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 ETFRF1Q6IPR1 90 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 IGLV11-55A0A075B6I3 123 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 HELTA6NFD8 242 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 K7EIM0 57 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 HOXA3O43365 443 aaPredicted RBP11.88□□□□□ -0.51
VRK3-218ENST00000600031 ESDP10768 282 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 OR10J1P30954 320 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 MS4A10Q96PG2 267 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 SMR3AQ99954 134 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 LINC00527Q9UJ94 153 aa11.88□□□□□ -0.51
VRK3-218ENST00000600031 IGKV1D-37A0A075B6S9 117 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 A0A1B0GV90 55 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 IGHG2P01859 326 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 OR5G3P0C626 314 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 GNG4P50150 75 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 FAM110DQ8TAY7 271 aaPredicted RBP11.87□□□□□ -0.51
VRK3-218ENST00000600031 MRPL18Q9H0U6 180 aaKnown RBP11.87□□□□□ -0.51
VRK3-218ENST00000600031 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 SLC17A3O00476 420 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 GATA2P23769 480 aaPredicted RBP11.87□□□□□ -0.51
VRK3-218ENST00000600031 TPPP2P59282 170 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 COX19Q49B96 90 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 SIGLECL1Q8N7X8 197 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 THAP8Q8NA92 274 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 RNF2Q99496 336 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 VPREB3Q9UKI3 123 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 V9GYV3 84 aa11.87□□□□□ -0.51
VRK3-218ENST00000600031 CRISP2P16562 243 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 RANP62826 216 aaKnown RBP11.86□□□□□ -0.51
VRK3-218ENST00000600031 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 C1orf194Q5T5A4 169 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 MRPL32Q9BYC8 188 aaKnown RBP11.86□□□□□ -0.51
VRK3-218ENST00000600031 OSTCQ9NRP0 149 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 A0A1W2PRE2 83 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 NUPR1O60356 82 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 CBLN1P23435 193 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 CRYBB3P26998 211 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 CRIP2P52943 208 aaPredicted RBP11.86□□□□□ -0.51
VRK3-218ENST00000600031 Q0VG73 95 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 TIGITQ495A1 244 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 C19orf54Q5BKX5 351 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 TMEM68Q96MH6 324 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 GSX1Q9H4S2 264 aaPredicted RBP11.86□□□□□ -0.51
VRK3-218ENST00000600031 S4R3C0 116 aa11.86□□□□□ -0.51
VRK3-218ENST00000600031 TRAV41A0A0B4J266 112 aa11.85□□□□□ -0.51
VRK3-218ENST00000600031 OR2J3O76001 311 aa11.85□□□□□ -0.51
VRK3-218ENST00000600031 NDUFB8O95169 186 aa11.85□□□□□ -0.51
VRK3-218ENST00000600031 MT-ND6P03923 174 aa11.85□□□□□ -0.51
VRK3-218ENST00000600031 IGF1P05019 195 aa11.85□□□□□ -0.51
VRK3-218ENST00000600031 C8orf88P0DMB2 117 aa11.85□□□□□ -0.51
VRK3-218ENST00000600031 ZNF503Q96F45 646 aa11.85□□□□□ -0.51
VRK3-218ENST00000600031 A0A1B0GUS0 222 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 OR7C2O60412 319 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 DUX5Q96PT3 197 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 FLNBO75369 2602 aaKnown RBP11.84□□□□□ -0.51
VRK3-218ENST00000600031 KIR2DL5BA0A0G2JN68 375 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 KIR2DL5BA0A0G2JPC4 375 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 TCRBV4S1A1TA0A5B7 111 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 GRIFINA4D1Z8 144 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 USF2Q15853 346 aaPredicted RBP11.84□□□□□ -0.51
VRK3-218ENST00000600031 KIR2DL5AQ8N109 375 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 ZNF355PQ9NSJ1 428 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
VRK3-218ENST00000600031 ISLRO14498 428 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 OR5I1Q13606 314 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 KLK9Q2XQG4 91 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 THYN1Q9P016 225 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 FBXL7Q9UJT9 491 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 KLK9Q9UKQ9 250 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 LY6G6DO95868 133 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 OR8I2Q8N0Y5 310 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 TRGV9Q99603 122 aa11.83□□□□□ -0.52
VRK3-218ENST00000600031 ZNF705FA8MVS1 300 aaPredicted RBP11.82□□□□□ -0.52
VRK3-218ENST00000600031 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
VRK3-218ENST00000600031 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
VRK3-218ENST00000600031 IGLC1P0CG04 106 aa11.82□□□□□ -0.52
VRK3-218ENST00000600031 ZNF705DP0CH99 300 aaPredicted RBP11.82□□□□□ -0.52
VRK3-218ENST00000600031 ZNF705BP0CI00 300 aaPredicted RBP11.82□□□□□ -0.52
VRK3-218ENST00000600031 SUMO1P63165 101 aaKnown RBP11.82□□□□□ -0.52
VRK3-218ENST00000600031 TMEM95Q3KNT9 176 aa11.82□□□□□ -0.52
VRK3-218ENST00000600031 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
VRK3-218ENST00000600031 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
VRK3-218ENST00000600031 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 F8W735 103 aaPredicted RBP11.81□□□□□ -0.52
VRK3-218ENST00000600031 SERF1AO75920 110 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 PPIFP30405 207 aaKnown RBP11.81□□□□□ -0.52
VRK3-218ENST00000600031 RHOGP84095 191 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms