RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.94□□□□□ -0.82
USHBP1-207ENST00000597928 NPIPB5A8MRT5 1133 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 SPRY2O43597 315 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 TWIST1Q15672 202 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 ZNF672Q499Z4 452 aaPredicted RBP9.94□□□□□ -0.82
USHBP1-207ENST00000597928 BPIFA4PQ86YQ2 179 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 C18orf32Q8TCD1 76 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 WFDC12Q8WWY7 111 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 RAB37Q96AX2 223 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 GRAMD2BQ96HH9 432 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 MRPL32Q9BYC8 188 aaKnown RBP9.94□□□□□ -0.82
USHBP1-207ENST00000597928 RPP21Q9H633 154 aaKnown RBP9.94□□□□□ -0.82
USHBP1-207ENST00000597928 SIGLEC9Q9Y336 463 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 F11RQ9Y624 299 aaKnown RBP9.94□□□□□ -0.82
USHBP1-207ENST00000597928 C9JCJ5 164 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 PRSS46E5RG02 174 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 CA7P43166 264 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 GUSBP1Q15486 140 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 COL5A1-AS1Q5SY13 56 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 TMEM167AQ8TBQ9 72 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 ZNF596Q8TC21 504 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 GPR183P32249 361 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 LGALS7P47929 136 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 MEF2CQ06413 473 aaPredicted RBP9.94□□□□□ -0.82
USHBP1-207ENST00000597928 OR4B1Q8NGF8 309 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 RNASEH2CQ8TDP1 164 aaKnown RBP9.94□□□□□ -0.82
USHBP1-207ENST00000597928 C2orf88Q9BSF0 95 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 NACAE9PAV3 2078 aa9.94□□□□□ -0.82
USHBP1-207ENST00000597928 ABCA12Q86UK0 2595 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 APOHP02749 345 aaPredicted RBP9.93□□□□□ -0.82
USHBP1-207ENST00000597928 LY6EQ16553 131 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 LINC00322Q6ZN03 302 aaPredicted RBP9.93□□□□□ -0.82
USHBP1-207ENST00000597928 OR5AN1Q8NGI8 311 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 KLK15Q9H2R5 256 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 UQCR10Q9UDW1 63 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 NUDT3O95989 172 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 TDGF1P3P51864 188 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 YPEL3P61236 119 aaPredicted RBP9.93□□□□□ -0.82
USHBP1-207ENST00000597928 TPTE2P1Q5T6R2 138 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 BCL6BQ8N143 479 aaPredicted RBP9.93□□□□□ -0.82
USHBP1-207ENST00000597928 TMEM75Q8N9X5 138 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 TEX45Q8NA69 505 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 TMEM208Q9BTX3 173 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 SLC25A39Q9BZJ4 359 aaPredicted RBP9.93□□□□□ -0.82
USHBP1-207ENST00000597928 RAB1BQ9H0U4 201 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 FBLL1A6NHQ2 334 aaKnown RBP9.93□□□□□ -0.82
USHBP1-207ENST00000597928 CGB3P0DN86 165 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 CGB7P0DN87 165 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 HLA-DMBP28068 263 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 NMUP48645 174 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
USHBP1-207ENST00000597928 ARMS2P0C7Q2 107 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 SP5Q6BEB4 398 aaPredicted RBP9.92□□□□□ -0.82
USHBP1-207ENST00000597928 ASCL5Q7RTU5 278 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 FXYD5Q96DB9 178 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 FAM167A-AS1Q96KT0 104 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 CHRDL1Q9BU40 450 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 LAMTOR2Q9Y2Q5 125 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 TCRAP04437 139 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 BTF3P20290 206 aaKnown RBP9.92□□□□□ -0.82
USHBP1-207ENST00000597928 CFHR2P36980 270 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 RELQ04864 619 aaPredicted RBP9.92□□□□□ -0.82
USHBP1-207ENST00000597928 ZNF833PQ6ZTB9 187 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 STXBP6Q8NFX7 210 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 OR4A5Q8NH83 315 aa9.92□□□□□ -0.82
USHBP1-207ENST00000597928 LOC105371242A0A075B767 164 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 EVI2AP22794 236 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 CEACAM8P31997 349 aaPredicted RBP9.91□□□□□ -0.82
USHBP1-207ENST00000597928 S100A7P31151 101 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 C8orf49Q96NF6 230 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 MAP1LC3CQ9BXW4 147 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 BUB1B-PAK6H3BSN5 160 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 LIPFP07098 398 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 GATA4P43694 442 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 GDF5OSQ5U4N7 250 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 IGFL2Q6UWQ7 119 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 TMEM70Q9BUB7 260 aa9.91□□□□□ -0.82
USHBP1-207ENST00000597928 TMEM189A5PLL7 270 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 FAM181BA6NEQ2 426 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 HLA-DRB1P01911 266 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 STPG4Q8N801 248 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 DPM3Q9P2X0 92 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 TMEM213A2RRL7 107 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 B9A039 149 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 PRSS1P07477 247 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 TMPRSS3P57727 454 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 NDPQ00604 133 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 RNF125Q96EQ8 232 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 C19orf24Q9BVV8 132 aa9.9□□□□□ -0.82
USHBP1-207ENST00000597928 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.83
USHBP1-207ENST00000597928 LINC00310P59036 64 aa9.9□□□□□ -0.83
USHBP1-207ENST00000597928 TMEM155Q4W5P6 130 aa9.9□□□□□ -0.83
USHBP1-207ENST00000597928 COA6Q5JTJ3 125 aaKnown RBP9.9□□□□□ -0.83
USHBP1-207ENST00000597928 GLMPQ8WWB7 406 aa9.9□□□□□ -0.83
USHBP1-207ENST00000597928 IGHV3-11P01762 117 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 A0A087X0K7 114 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 HTN1P15515 57 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 SRD5A1P18405 259 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms