RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	ACOT7L	Q6ZUV0	252 aa		7.45	□□□□□ -1.22
LSM4-205	ENST00000597776	LRTM2	Q8N967	370 aa		7.45	□□□□□ -1.22
LSM4-205	ENST00000597776	OR1B1	Q8NGR6	318 aa		7.45	□□□□□ -1.22
LSM4-205	ENST00000597776	IGF2BP2-AS1	Q96M15	143 aa		7.45	□□□□□ -1.22
LSM4-205	ENST00000597776	BCL7B	Q9BQE9	202 aa		7.45	□□□□□ -1.22
LSM4-205	ENST00000597776	TMEM147	Q9BVK8	224 aa		7.45	□□□□□ -1.22
LSM4-205	ENST00000597776	TRAV8-2	A0A0B4J237	113 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	PIGBOS1	A0A0B4J2F0	54 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	CRX	O43186	299 aa	Predicted RBP	7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	NOL3	O60936	208 aa	Known RBP	7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	SFT2D2	O95562	160 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	CFD	P00746	253 aa	Predicted RBP	7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	PRB4	P10163	310 aa	Predicted RBP	7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	AP3S2	P59780	193 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	FGL1	Q08830	312 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	ZNF575	Q86XF7	245 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	BAP18	Q8IXM2	172 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	TOMM5	Q8N4H5	51 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	BPIFC	Q8NFQ6	507 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	OR11H7	Q8NGC8	314 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	CIB3	Q96Q77	187 aa	Predicted RBP	7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	SLC45A2	Q9UMX9	530 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	TMED3	Q9Y3Q3	217 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776		V9GYH0	126 aa		7.44	□□□□□ -1.22
LSM4-205	ENST00000597776	SMCO3	A2RU48	225 aa		7.43	□□□□□ -1.22
LSM4-205	ENST00000597776		H3BRN7	92 aa		7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	INS	P01308	110 aa		7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	RPP30	P78346	268 aa	Known RBP	7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	RNF212	Q495C1	297 aa		7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	ZNF738	Q8NE65	137 aa		7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	OR4D5	Q8NGN0	318 aa		7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	SLC25A21	Q9BQT8	299 aa	Predicted RBP	7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	STRAP	Q9Y3F4	350 aa	Known RBP	7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	NACA	E9PAV3	2078 aa		7.43	□□□□□ -1.22
LSM4-205	ENST00000597776	TRAV12-2	A0A075B6T6	113 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	ADAP1	O75689	374 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	DUSP14	O95147	198 aa	Known RBP	7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	DEFB130B	P0DP73	79 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	DEFB130A	P0DP74	79 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	AZU1	P20160	251 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	POLR2G	P62487	172 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	FCN2	Q15485	313 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	C1orf134	Q5TEV5	83 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	CYP2G1P	Q6ZSU1	146 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	GPR82	Q96P67	336 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	SHANK2-AS3	Q9BTD1	123 aa		7.42	□□□□□ -1.22
LSM4-205	ENST00000597776	HSPG2	P98160	4391 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	ABCA13	Q86UQ4	5058 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	PLAC8L1	A1L4L8	177 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	LYRM9	A8MSI8	78 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	BOLA2-SMG1P6	H3BVE0	249 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	CCNK	O75909	580 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	IL5	P05113	134 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	HIST1H1A	Q02539	215 aa	Predicted RBP	7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	SOHLH1	Q5JUK2	328 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	TMEM144	Q7Z5S9	345 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	C15orf53	Q8NAA6	179 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	UHRF2	Q96PU4	802 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	ATG101	Q9BSB4	218 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	HIGD1A	Q9Y241	93 aa		7.41	□□□□□ -1.22
LSM4-205	ENST00000597776	C9orf170	A2RU37	121 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776		F5H768	121 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	SSSCA1	O60232	199 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	HYPM	O75409	117 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	OR5G3	P0C626	314 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	LINC00869	P0C866	280 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	RAP2B	P61225	183 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	RRAS2	P62070	204 aa	Predicted RBP	7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	RHOB	P62745	196 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	ID3	Q02535	119 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	OR8A1	Q8NGG7	326 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	KRTAP4-5	Q9BYR2	181 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	PSENEN	Q9NZ42	101 aa		7.4	□□□□□ -1.22
LSM4-205	ENST00000597776	PMS2P5	A8MQ11	134 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	NUDT3	O95989	172 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	SNRPC	P09234	159 aa	Known RBP	7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	METTL15P1	P0C7V9	234 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	HTN1	P15515	57 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	RPL7	P18124	248 aa	Known RBP	7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	CXCL3	P19876	107 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	TSPO	P30536	169 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	S100A7	P31151	101 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	TNP2	Q05952	138 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	CCDC190	Q86UF4	302 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	LINC01587	Q99440	93 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776	FLVCR2	Q9UPI3	526 aa		7.39	□□□□□ -1.23
LSM4-205	ENST00000597776		A0A087X0K7	114 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	S100A5	P33763	92 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	FAM3B	P58499	235 aa	Predicted RBP	7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	PLP1	P60201	277 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	UBE2M	P61081	183 aa	Known RBP	7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	B2M	P61769	119 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	SLC38A11	Q08AI6	406 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	PSG3	Q16557	428 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	PATE2	Q6UY27	113 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	ZNRF2	Q8NHG8	242 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	DEDD2	Q8WXF8	326 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	ARL6	Q9H0F7	186 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	PPP1R14D	Q9NXH3	145 aa		7.38	□□□□□ -1.23

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