RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 SEC22AQ96IW7 307 aa4.9□□□□□ -1.63
LINC00343-204ENST00000596398 PBDC1Q9BVG4 233 aa4.9□□□□□ -1.63
LINC00343-204ENST00000596398 ICOSQ9Y6W8 199 aa4.9□□□□□ -1.63
LINC00343-204ENST00000596398 METTL21EPA6NDL7 271 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 BOLA2-SMG1P6H3BVE0 249 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 CORTO00230 105 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 IGLV2-11P01706 119 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 RD3LP0DJH9 198 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 ETV6P41212 452 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 GNG2P59768 71 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 TBCEQ15813 527 aaPredicted RBP4.89□□□□□ -1.63
LINC00343-204ENST00000596398 C1orf146Q5VVC0 180 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 SFXN4Q6P4A7 337 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 PRSS54Q6PEW0 395 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 TMEM256Q8N2U0 113 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 RNF182Q8N6D2 247 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 SLC35G3Q8N808 338 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 LRTM2Q8N967 370 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 BEST4Q8NFU0 473 aa4.89□□□□□ -1.63
LINC00343-204ENST00000596398 RCL1Q9Y2P8 373 aaKnown RBP4.89□□□□□ -1.63
LINC00343-204ENST00000596398 K7EP13 123 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 DUSP14O95147 198 aaKnown RBP4.88□□□□□ -1.63
LINC00343-204ENST00000596398 RPL5P46777 297 aaKnown RBP4.88□□□□□ -1.63
LINC00343-204ENST00000596398 HSPA13P48723 471 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 SUB1P53999 127 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC00343-204ENST00000596398 RPS25P62851 125 aaKnown RBP4.88□□□□□ -1.63
LINC00343-204ENST00000596398 GNGT1P63211 74 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 Q6ZRU5 148 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 AHSA2Q719I0 299 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 IL22RA2Q969J5 263 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 MRGPRFQ96AM1 343 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 DAPK2Q9UIK4 370 aa4.88□□□□□ -1.63
LINC00343-204ENST00000596398 TRGV2A0A075B6R0 118 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 A0A0B4J293 547 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 IFITM10A6NMD0 228 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 IFITM5A6NNB3 132 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 SNURFLB1AK76 121 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 PRAF2O60831 178 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 ZNF324O75467 553 aaPredicted RBP4.87□□□□□ -1.63
LINC00343-204ENST00000596398 ARL6IP5O75915 188 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 IGHV3-53P01767 116 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 ZNF182P17025 639 aaPredicted RBP4.87□□□□□ -1.63
LINC00343-204ENST00000596398 HERV-K104P61576 105 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 RHOBP62745 196 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 ARL6IP1Q15041 203 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 ACOT6Q3I5F7 207 aaPredicted RBP4.87□□□□□ -1.63
LINC00343-204ENST00000596398 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 RBPMSQ93062 196 aaKnown RBP4.87□□□□□ -1.63
LINC00343-204ENST00000596398 ACY3Q96HD9 319 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 PSORS1C1Q9UIG5 152 aa4.87□□□□□ -1.63
LINC00343-204ENST00000596398 TRAV8-2A0A0B4J237 113 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 TRAV5A0A0B4J249 113 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 ERICH4A6NGS2 130 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 INS-IGF2F8WCM5 200 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 SUPT4H1P63272 117 aaKnown RBP4.86□□□□□ -1.63
LINC00343-204ENST00000596398 FABP5Q01469 135 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 HIST1H1AQ02539 215 aaPredicted RBP4.86□□□□□ -1.63
LINC00343-204ENST00000596398 ZNF415Q09FC8 603 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 GAMTQ14353 236 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 BSXQ3C1V8 233 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 PHLDA2Q53GA4 152 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 LAIR2Q6ISS4 152 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 NEGR1Q7Z3B1 354 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 HOGA1Q86XE5 327 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 CCDC28AQ8IWP9 274 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 OR8I2Q8N0Y5 310 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 C10orf126Q8N4M7 172 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 ARRDC1Q8N5I2 433 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 ZNF555Q8NEP9 628 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 RSG1Q9BU20 258 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 PPP1R14DQ9NXH3 145 aa4.86□□□□□ -1.63
LINC00343-204ENST00000596398 LSM2Q9Y333 95 aaKnown RBP4.86□□□□□ -1.63
LINC00343-204ENST00000596398 SMIM30A4D0T7 59 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 MEIS3P1A6NDR6 274 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 IBA57-AS1B1ANH7 110 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 H7BYZ3 331 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 OR5AC1P0C628 307 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 HSMCR30P0CW71 290 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 PSMB9P28065 219 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 NUP62P37198 522 aaPredicted RBP4.85□□□□□ -1.63
LINC00343-204ENST00000596398 RFX2P48378 723 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 ZNF90Q03938 601 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 SPHARQ15513 63 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 MRPL23Q16540 153 aaKnown RBP4.85□□□□□ -1.63
LINC00343-204ENST00000596398 C1orf194Q5T5A4 169 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 CCDC197Q8NCU1 140 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 ZNF738Q8NE65 137 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 OR52E5Q8NH55 327 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 ZNF2Q9BSG1 426 aaPredicted RBP4.85□□□□□ -1.63
LINC00343-204ENST00000596398 MND1Q9BWT6 205 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 PARD6GQ9BYG4 376 aaPredicted RBP4.85□□□□□ -1.63
LINC00343-204ENST00000596398 CCDC90BQ9GZT6 254 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 MED4Q9NPJ6 270 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 FUT9Q9Y231 359 aa4.85□□□□□ -1.63
LINC00343-204ENST00000596398 TRGV1A0A0A0MS02 117 aa4.84□□□□□ -1.63
LINC00343-204ENST00000596398 RBFOX3A6NFN3 312 aa4.84□□□□□ -1.63
LINC00343-204ENST00000596398 E5RGE8 158 aa4.84□□□□□ -1.63
LINC00343-204ENST00000596398 CASQ2O14958 399 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms