RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ZNF546Q86UE3 836 aa9.46□□□□□ -0.9
USE1-207ENST00000596136 LINC00052Q96N35 136 aa9.46□□□□□ -0.9
USE1-207ENST00000596136 MARVELD1Q9BSK0 173 aa9.46□□□□□ -0.9
USE1-207ENST00000596136 SCRT1Q9BWW7 348 aa9.46□□□□□ -0.9
USE1-207ENST00000596136 HRH4Q9H3N8 390 aa9.46□□□□□ -0.9
USE1-207ENST00000596136 SLC25A22Q9H936 323 aa9.46□□□□□ -0.9
USE1-207ENST00000596136 GPN1Q9HCN4 374 aaPredicted RBP9.46□□□□□ -0.9
USE1-207ENST00000596136 LYRM2Q9NU23 88 aaPredicted RBP9.46□□□□□ -0.9
USE1-207ENST00000596136 A0A0J9YX75 114 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 FAM24AA6NFZ4 105 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 AGPAT2O15120 278 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 JTBO76095 146 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 RBMY1A1P0DJD3 496 aaKnown RBP9.45□□□□□ -0.9
USE1-207ENST00000596136 RBMY1CP0DJD4 496 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 RPL7P18124 248 aaKnown RBP9.45□□□□□ -0.9
USE1-207ENST00000596136 PVALBP20472 110 aaPredicted RBP9.45□□□□□ -0.9
USE1-207ENST00000596136 CAV2P51636 162 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 DEFB1P60022 68 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 SLC38A11Q08AI6 406 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 PMS2P11Q13670 270 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 RBMY1FQ15415 496 aaKnown RBP9.45□□□□□ -0.9
USE1-207ENST00000596136 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 C16orf92Q96LL3 132 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 C20orf173Q96LM9 149 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 MGST2Q99735 147 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 MFFQ9GZY8 342 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 ARL6Q9H0F7 186 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 RPRMQ9NS64 109 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 CLEC5AQ9NY25 188 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 DOK5Q9P104 306 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 RNF24Q9Y225 148 aa9.45□□□□□ -0.9
USE1-207ENST00000596136 A0A087X0K7 114 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 TRAV8-2A0A0B4J237 113 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 IGHV4-28A0A0C4DH34 117 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 INMT-MINDY4F8WBC2 141 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 GOSR2O14653 212 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 MRPS12O15235 138 aaKnown RBP9.44□□□□□ -0.9
USE1-207ENST00000596136 CST7O76096 145 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 OR5G3P0C626 314 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 S100A11P31949 105 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 SULT1A1P50225 295 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 BCAP31P51572 246 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 ZNF705AQ6ZN79 300 aaPredicted RBP9.44□□□□□ -0.9
USE1-207ENST00000596136 TMEM252Q8N6L7 170 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 ZNF709Q8N972 641 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
USE1-207ENST00000596136 UHRF2Q96PU4 802 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 NEU1Q99519 415 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 NMES1Q9C002 83 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 ARV1Q9H2C2 271 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 XCL2Q9UBD3 114 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 WDR83OSQ9Y284 106 aa9.44□□□□□ -0.9
USE1-207ENST00000596136 IGSF23A1L1A6 192 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 DEFB4AO15263 64 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 NANOS2P60321 138 aaKnown RBP9.43□□□□□ -0.9
USE1-207ENST00000596136 S100A10P60903 97 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 PRR20EP86478 221 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 PRR20CP86479 221 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 PRR20DP86480 221 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 PRR20BP86481 221 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 PRR20AP86496 221 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 EBLN2Q6P2I7 272 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 TMEM37Q8WXS4 190 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
USE1-207ENST00000596136 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
USE1-207ENST00000596136 ELOA3CA0A087WX78 387 aaPredicted RBP9.42□□□□□ -0.9
USE1-207ENST00000596136 ZNF705FA8MVS1 300 aaPredicted RBP9.42□□□□□ -0.9
USE1-207ENST00000596136 F6UB75 175 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
USE1-207ENST00000596136 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
USE1-207ENST00000596136 CAMLGP49069 296 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 DEFA1P59665 94 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 DEFA3P59666 94 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 PSG9Q00887 426 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 RAB31Q13636 194 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 ATP6V1FQ16864 119 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 FAM78BQ5VT40 261 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 AMTNQ6UX39 209 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 STX12Q86Y82 276 aa9.42□□□□□ -0.9
USE1-207ENST00000596136 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 SIX6O95475 246 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 CXCL2P19875 107 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 RPL29P47914 159 aaKnown RBP9.41□□□□□ -0.9
USE1-207ENST00000596136 HBG1P69891 147 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 HBG2P69892 147 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 CYCSP99999 105 aaKnown RBP9.41□□□□□ -0.9
USE1-207ENST00000596136 LINC00305Q7Z4B0 112 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 OR4B1Q8NGF8 309 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 LINC00476Q8WZB0 136 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 SLC35B3Q9H1N7 401 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 DNAJC4Q9NNZ3 241 aa9.41□□□□□ -0.9
USE1-207ENST00000596136 SMIM9A6NGZ8 99 aa9.4□□□□□ -0.9
USE1-207ENST00000596136 H0YIZ8 118 aa9.4□□□□□ -0.9
USE1-207ENST00000596136 RLN2P04090 185 aa9.4□□□□□ -0.9
USE1-207ENST00000596136 CXCL3P19876 107 aa9.4□□□□□ -0.9
USE1-207ENST00000596136 H2BFSP57053 126 aa9.4□□□□□ -0.9
USE1-207ENST00000596136 C10orf113Q5VZT2 155 aa9.4□□□□□ -0.9
USE1-207ENST00000596136 MIC13Q5XKP0 118 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms