RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PSMB3P49720 205 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 PPT1P50897 306 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 MORN5Q5VZ52 161 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 ZNF414Q96IQ9 312 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 PAXXQ9BUH6 204 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 SCRT1Q9BWW7 348 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 SLC25A2Q9BXI2 301 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 TMPRSS5Q9H3S3 457 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 GNG13Q9P2W3 67 aa10.01□□□□□ -0.81
SHKBP1-209ENST00000595803 RAB19A4D1S5 217 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 K7EMT4 169 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 ZNF207O43670 478 aaKnown RBP10□□□□□ -0.81
SHKBP1-209ENST00000595803 PEA15Q15121 130 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 GUK1Q16774 197 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 LEMD1Q68G75 181 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 OR11H1Q8NG94 326 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 FAM167A-AS1Q96KT0 104 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 EIF5A2Q9GZV4 153 aaKnown RBP10□□□□□ -0.81
SHKBP1-209ENST00000595803 TMEM167BQ9NRX6 74 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 UFC1Q9Y3C8 167 aa10□□□□□ -0.81
SHKBP1-209ENST00000595803 A0A1W2PS18 150 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 RBFOX3A6NFN3 312 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 PMS2P11Q13670 270 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 HAGHQ16775 308 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 UNQ9165/PRO28630Q6UXU0 137 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 C8orf86Q6ZUL3 223 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 BPIFA4PQ86YQ2 179 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 OR8I2Q8N0Y5 310 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 TMEM190Q8WZ59 177 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 FAM210AQ96ND0 272 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
SHKBP1-209ENST00000595803 OR10J4P0C629 311 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 PYYP10082 97 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 CRYBB3P26998 211 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 HOXD3P31249 432 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 TAGLN2P37802 199 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 UBE2L3P68036 154 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 DEFB136Q30KP8 78 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 OR4F17Q8NGA8 305 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 ZNF503Q96F45 646 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 GRAMD2BQ96HH9 432 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 OR4F4Q96R69 305 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 CITED4Q96RK1 184 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 TREM1Q9NP99 234 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 MANBALQ9NQG1 85 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 U3KQE9 123 aa9.98□□□□□ -0.81
SHKBP1-209ENST00000595803 IGHV3-49A0A0A0MS15 119 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 IGHV3-66A0A0C4DH42 116 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 CCL24O00175 119 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 LGALS9O00182 355 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 BUB3O43684 328 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 PAGE4O60829 102 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 NBEAP1P0C6P0 100 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 HIST1H1EP10412 219 aaKnown RBP9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 RPL7P18124 248 aaKnown RBP9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 BMI1P35226 326 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 SLURP1P55000 103 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 SYNJ2BPP57105 145 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 KRTAP10-3P60369 221 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 UBE2G2P60604 165 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 KLF5Q13887 457 aaPredicted RBP9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 NSUN5P1Q3KNT7 163 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 TM4SF20Q53R12 229 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 TOR2AQ5JU69 321 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 C1orf194Q5T5A4 169 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 UQCC3Q6UW78 93 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 REC114Q7Z4M0 266 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 NDUFA11Q86Y39 141 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 DUX3Q96PT4 197 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 RARRES2Q99969 163 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
SHKBP1-209ENST00000595803 IGHV3OR16-13A0A075B7E8 117 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 IGHV3-74A0A0B4J1X5 117 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 IGHV7-4-1A0A0J9YVY3 117 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 ZNF785A8K8V0 405 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 APOHP02749 345 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 BCL2P10415 239 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 CST9LP1Q5W188 147 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 SUN5Q8TC36 379 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 RXFP4Q8TDU9 374 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 BLNKQ8WV28 456 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 FXYD5Q96DB9 178 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 RAX2Q96IS3 184 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 GPR82Q96P67 336 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 TMEM231Q9H6L2 316 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 DAZ1Q9NQZ3 744 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 PEMTQ9UBM1 199 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 SMPXQ9UHP9 88 aa9.96□□□□□ -0.82
SHKBP1-209ENST00000595803 SNRPCP09234 159 aaKnown RBP9.95□□□□□ -0.82
SHKBP1-209ENST00000595803 ATF4P18848 351 aaPredicted RBP9.95□□□□□ -0.82
SHKBP1-209ENST00000595803 MYCNOSP40205 109 aa9.95□□□□□ -0.82
SHKBP1-209ENST00000595803 GALR1P47211 349 aa9.95□□□□□ -0.82
SHKBP1-209ENST00000595803 C16orf54Q6UWD8 224 aa9.95□□□□□ -0.82
SHKBP1-209ENST00000595803 RHPN1-AS1Q9BWJ2 59 aa9.95□□□□□ -0.82
SHKBP1-209ENST00000595803 SMDT1Q9H4I9 107 aa9.95□□□□□ -0.82
SHKBP1-209ENST00000595803 M0QZ24 198 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms